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2 changes: 1 addition & 1 deletion amrex-hydro/docs_html/.buildinfo
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# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
config: a7d950959bdfccd0d66866f230601947
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6 changes: 3 additions & 3 deletions amrex-hydro/docs_html/BDS.html
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<meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />

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amrex-hydro
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6 changes: 3 additions & 3 deletions amrex-hydro/docs_html/InOutSolvability.html
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<meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />

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<title>Enforcing inflow-outflow solvability &mdash; amrex-hydro 24.09-dev documentation</title>
<title>Enforcing inflow-outflow solvability &mdash; amrex-hydro 24.10-dev documentation</title>
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6 changes: 3 additions & 3 deletions amrex-hydro/docs_html/Install.html
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<meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />

<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>Installation Guide &mdash; amrex-hydro 24.09-dev documentation</title>
<title>Installation Guide &mdash; amrex-hydro 24.10-dev documentation</title>
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amrex-hydro
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8 changes: 4 additions & 4 deletions amrex-hydro/docs_html/Introduction.html
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<meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />

<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>Introduction &mdash; amrex-hydro 24.09-dev documentation</title>
<title>Introduction &mdash; amrex-hydro 24.10-dev documentation</title>
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cell-centered velocity update that approximately obeys a divergence constraint).</p></li>
</ul>
</li>
<li><p><a class="reference external" href="https://amrex-codes.github.io/amrex/docs_html/EB.html#sec-eb-redistribution" title="(in amrex v24.09-dev)"><span class="xref std std-ref">Redistribution</span></a>: AMReX contains schemes to address the “small cell problem” associated with explicit cut
<li><p><a class="reference external" href="https://amrex-codes.github.io/amrex/docs_html/EB.html#sec-eb-redistribution" title="(in amrex v24.10-dev)"><span class="xref std std-ref">Redistribution</span></a>: AMReX contains schemes to address the “small cell problem” associated with explicit cut
cell algorithms (part of step 4 for problems with embedded boundaries).</p></li>
<li><p><a class="reference internal" href="Utilities.html#utilities"><span class="std std-ref">Helper functions</span></a>: to do things like compute slopes, create fluxes from face-centered values, and
create the convective term from fluxes (used in all but step 2).</p></li>
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8 changes: 4 additions & 4 deletions amrex-hydro/docs_html/Projections.html
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<meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />

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<title>Projection Methods &mdash; amrex-hydro 24.09-dev documentation</title>
<title>Projection Methods &mdash; amrex-hydro 24.10-dev documentation</title>
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amrex-hydro
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Both classes provide member functions <code class="docutils literal notranslate"><span class="pre">getLinOp</span></code> and <code class="docutils literal notranslate"><span class="pre">getMLMG</span></code> to
access the underlying objects and allow for modification of the linear operator
and multigrid properties if needed.
Details of the linear solver implementations are in the <a class="reference external" href="https://amrex-codes.github.io/amrex/docs_html/LinearSolvers_Chapter.html#chap-linearsolvers" title="(in amrex v24.09-dev)"><span>Linear Solvers</span></a>
Details of the linear solver implementations are in the <a class="reference external" href="https://amrex-codes.github.io/amrex/docs_html/LinearSolvers_Chapter.html#chap-linearsolvers" title="(in amrex v24.10-dev)"><span>Linear Solvers</span></a>
section of AMReX’s documentation.</p>
<p id="projections-inputs">Both Projector classes provide the following parameters, which can be set in an
inputs file or on the command line. For the MacProjector, these must be preceded by
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6 changes: 3 additions & 3 deletions amrex-hydro/docs_html/Schemes.html
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<meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />

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<title>Advection schemes &mdash; amrex-hydro 24.09-dev documentation</title>
<title>Advection schemes &mdash; amrex-hydro 24.10-dev documentation</title>
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6 changes: 3 additions & 3 deletions amrex-hydro/docs_html/Utilities.html
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<meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />

<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>Helper functions &mdash; amrex-hydro 24.09-dev documentation</title>
<title>Helper functions &mdash; amrex-hydro 24.10-dev documentation</title>
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const DOCUMENTATION_OPTIONS = {
VERSION: '24.09-dev',
VERSION: '24.10-dev',
LANGUAGE: 'en',
COLLAPSE_INDEX: false,
BUILDER: 'html',
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<meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />

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<title>Boundary conditions &mdash; amrex-hydro 24.09-dev documentation</title>
<title>Boundary conditions &mdash; amrex-hydro 24.10-dev documentation</title>
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amrex-hydro
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<section id="boundary-conditions">
<span id="bcs"></span><h1>Boundary conditions<a class="headerlink" href="#boundary-conditions" title="Link to this heading"></a></h1>
<p>AMReX-Hydro uses underlying AMReX functionality in implementing boundary conditions
(see AMReX’s documentation section <a class="reference external" href="https://amrex-codes.github.io/amrex/docs_html/Basics.html#sec-basics-boundary" title="(in amrex v24.09-dev)"><span>Boundary Conditions</span></a>).
(see AMReX’s documentation section <a class="reference external" href="https://amrex-codes.github.io/amrex/docs_html/Basics.html#sec-basics-boundary" title="(in amrex v24.10-dev)"><span>Boundary Conditions</span></a>).
Physical boundary conditions, such as
inflow, outflow, slip/no-slip walls, etc. are ultimately linked to
mathematical Dirichlet or Neumann conditions.
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If a position-dependent BCs are passed in, they take precedent and single BC per face <code class="code highlight cpp c++ docutils literal highlight-c++"><span class="n">BCRecs</span></code> are
ignored.</p>
<p>The MacProjector supports mixed boundary conditions by making use of the underlying linear solver’s
Robin BC (<a class="reference external" href="https://amrex-codes.github.io/amrex/docs_html/LinearSolvers.html#sec-linearsolver-bc" title="(in amrex v24.09-dev)"><span>Boundary Conditions</span></a>) option. Robin boundary conditions are formulated as
Robin BC (<a class="reference external" href="https://amrex-codes.github.io/amrex/docs_html/LinearSolvers.html#sec-linearsolver-bc" title="(in amrex v24.10-dev)"><span>Boundary Conditions</span></a>) option. Robin boundary conditions are formulated as
<span class="math notranslate nohighlight">\(a\phi + b\frac{\partial\phi}{\partial n} = f\)</span>.
<span class="math notranslate nohighlight">\(a\)</span>, <span class="math notranslate nohighlight">\(b\)</span>, and <span class="math notranslate nohighlight">\(f\)</span> are each a cell-centered (real) <code class="code highlight cpp c++ docutils literal highlight-c++"><span class="n">MultiFab</span></code> that carries
the relevant values in the first ghost cell. All three must be specified on each level with a call to
<code class="code highlight cpp c++ docutils literal highlight-c++"><span class="n">setLevelBC</span></code> (see <a class="reference external" href="https://amrex-codes.github.io/amrex/docs_html/LinearSolvers.html#sec-linearsolver-bc" title="(in amrex v24.09-dev)"><span>Boundary Conditions</span></a> for usage).</p>
<code class="code highlight cpp c++ docutils literal highlight-c++"><span class="n">setLevelBC</span></code> (see <a class="reference external" href="https://amrex-codes.github.io/amrex/docs_html/LinearSolvers.html#sec-linearsolver-bc" title="(in amrex v24.10-dev)"><span>Boundary Conditions</span></a> for usage).</p>
<p>The NodalProjector can support mixed boundary conditions through the use of an overset mask
(see <a class="reference external" href="https://amrex-codes.github.io/amrex/docs_html/LinearSolvers.html#sec-linearsolver-bc" title="(in amrex v24.09-dev)"><span>Boundary Conditions</span></a>).
(see <a class="reference external" href="https://amrex-codes.github.io/amrex/docs_html/LinearSolvers.html#sec-linearsolver-bc" title="(in amrex v24.10-dev)"><span>Boundary Conditions</span></a>).
The overset mask specifies a Dirichlet BC with 0 (meaning no solve is needed since the solution is known) or Neumann with 1 (meaning do the solve). Note this is an integer (not bool) MultiFab, so the values must be only either 0 or 1.</p>
</section>
<section id="advective-bc-details">
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<head>
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<title>Index &mdash; amrex-hydro 24.09-dev documentation</title>
<title>Index &mdash; amrex-hydro 24.10-dev documentation</title>
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