Update URL

.github/workflows/cuda.yml

@@ -13,7 +13,7 @@ concurrency:
 
 jobs:
   cuda_eb_3d:
-    if: ${{ github.repository == 'AMReX-Codes/incflo' || github.event_name != 'schedule' }}
+    if: ${{ github.repository == 'AMReX-Fluids/incflo' || github.event_name != 'schedule' }}
     name: CUDA EB 3D
     runs-on: ubuntu-20.04
     env: {CXXFLAGS: "-Werror -Wall -Wextra -Wpedantic -Wnull-dereference -Wfloat-conversion -Wshadow -Woverloaded-virtual -Wnon-virtual-dtor -Wlogical-op -Wmisleading-indentation -Wduplicated-cond -Wduplicated-branches -Wmissing-include-dirs"}
@@ -25,7 +25,7 @@ jobs:
     - name: Checkout AMReX-Hydro
       uses: actions/checkout@v3
       with:
-        repository: AMReX-Codes/AMReX-Hydro
+        repository: AMReX-Fluids/AMReX-Hydro
         path: AMReX-Hydro
     - name: Checkout AMReX
       uses: actions/checkout@v3
@@ -79,7 +79,7 @@ jobs:
         du -hs ~/.cache/ccache
 
   cuda_no_eb_2d:
-    if: ${{ github.repository == 'AMReX-Codes/incflo' || github.event_name != 'schedule' }}
+    if: ${{ github.repository == 'AMReX-Fluids/incflo' || github.event_name != 'schedule' }}
     name: CUDA NO EB 2D
     runs-on: ubuntu-20.04
     env: {CXXFLAGS: "-Werror -Wall -Wextra -Wpedantic -Wnull-dereference -Wfloat-conversion -Wshadow -Woverloaded-virtual -Wnon-virtual-dtor -Wlogical-op -Wmisleading-indentation -Wduplicated-cond -Wduplicated-branches -Wmissing-include-dirs"}
@@ -91,7 +91,7 @@ jobs:
     - name: Checkout AMReX-Hydro
       uses: actions/checkout@v3
       with:
-        repository: AMReX-Codes/AMReX-Hydro
+        repository: AMReX-Fluids/AMReX-Hydro
         path: AMReX-Hydro
     - name: Checkout AMReX
       uses: actions/checkout@v3

.github/workflows/docs.yml

@@ -22,7 +22,7 @@ jobs:
           make html
 
       - name: Deploy
-        if: github.event_name == 'push' && github.repository == 'AMReX-Codes/incflo' && github.ref == 'refs/heads/development'
+        if: github.event_name == 'push' && github.repository == 'AMReX-Fluids/incflo' && github.ref == 'refs/heads/development'
         uses: JamesIves/[email protected]
         with:
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

.github/workflows/gcc.yml

@@ -13,7 +13,7 @@ concurrency:
 
 jobs:
   gcc_eb_3d_super:
-    if: ${{ github.repository == 'AMReX-Codes/incflo' || github.event_name != 'schedule' }}
+    if: ${{ github.repository == 'AMReX-Fluids/incflo' || github.event_name != 'schedule' }}
     name: GCC EB 3D
     runs-on: ubuntu-latest
     env: {CXXFLAGS: "-Werror -Wall -Wextra -Wpedantic -Wnull-dereference -Wfloat-conversion -Wshadow -Woverloaded-virtual -Wnon-virtual-dtor -Wlogical-op -Wmisleading-indentation -Wduplicated-cond -Wduplicated-branches -Wmissing-include-dirs"}
@@ -25,7 +25,7 @@ jobs:
     - name: Checkout AMReX-Hydro
       uses: actions/checkout@v3
       with:
-        repository: AMReX-Codes/AMReX-Hydro
+        repository: AMReX-Fluids/AMReX-Hydro
         path: AMReX-Hydro
     - name: Checkout AMReX
       uses: actions/checkout@v3
@@ -83,7 +83,7 @@ jobs:
         mpiexec -n 2 build/incflo.ex test_3d/benchmark.uniform_velocity_sphere incflo.verbose=1 mac_proj.verbose=1 nodal_proj.verbose=1
 
   gcc_no_eb_3d_lib:
-    if: ${{ github.repository == 'AMReX-Codes/incflo' || github.event_name != 'schedule' }}
+    if: ${{ github.repository == 'AMReX-Fluids/incflo' || github.event_name != 'schedule' }}
     name: GCC NO EB 3D
     runs-on: ubuntu-latest
     env: {CXXFLAGS: "-Werror -Wall -Wextra -Wpedantic -Wnull-dereference -Wfloat-conversion -Wshadow -Woverloaded-virtual -Wnon-virtual-dtor -Wlogical-op -Wmisleading-indentation -Wduplicated-cond -Wduplicated-branches -Wmissing-include-dirs"}
@@ -95,7 +95,7 @@ jobs:
     - name: Checkout AMReX-Hydro
       uses: actions/checkout@v3
       with:
-        repository: AMReX-Codes/AMReX-Hydro
+        repository: AMReX-Fluids/AMReX-Hydro
         path: AMReX-Hydro
     - name: Checkout AMReX
       uses: actions/checkout@v3
@@ -168,7 +168,7 @@ jobs:
         mpiexec -n 2 build/incflo.ex test_no_eb_3d/benchmark.rayleigh_taylor max_step=3 incflo.verbose=1 mac_proj.verbose=1 nodal_proj.verbose=1
 
   gcc_eb_2d_lib:
-    if: ${{ github.repository == 'AMReX-Codes/incflo' || github.event_name != 'schedule' }}
+    if: ${{ github.repository == 'AMReX-Fluids/incflo' || github.event_name != 'schedule' }}
     name: GCC EB 2D
     runs-on: ubuntu-latest
     env: {CXXFLAGS: "-Werror -Wall -Wextra -Wpedantic -Wnull-dereference -Wfloat-conversion -Wshadow -Woverloaded-virtual -Wnon-virtual-dtor -Wlogical-op -Wmisleading-indentation -Wduplicated-cond -Wduplicated-branches -Wmissing-include-dirs"}
@@ -180,7 +180,7 @@ jobs:
     - name: Checkout AMReX-Hydro
       uses: actions/checkout@v3
       with:
-        repository: AMReX-Codes/AMReX-Hydro
+        repository: AMReX-Fluids/AMReX-Hydro
         path: AMReX-Hydro
     - name: Checkout AMReX
       uses: actions/checkout@v3
@@ -253,7 +253,7 @@ jobs:
         build/incflo.ex test_2d/benchmark.eb_flow_sphere incflo.verbose=1 mac_proj.verbose=1 nodal_proj.verbose=1
 
   gcc_no_eb_2d_super:
-    if: ${{ github.repository == 'AMReX-Codes/incflo' || github.event_name != 'schedule' }}
+    if: ${{ github.repository == 'AMReX-Fluids/incflo' || github.event_name != 'schedule' }}
     name: GCC NO EB 2D
     runs-on: ubuntu-latest
     env: {CXXFLAGS: "-Werror -Wall -Wextra -Wpedantic -Wnull-dereference -Wfloat-conversion -Wshadow -Woverloaded-virtual -Wnon-virtual-dtor -Wlogical-op -Wmisleading-indentation -Wduplicated-cond -Wduplicated-branches -Wmissing-include-dirs"}
@@ -265,7 +265,7 @@ jobs:
     - name: Checkout AMReX-Hydro
       uses: actions/checkout@v3
       with:
-        repository: AMReX-Codes/AMReX-Hydro
+        repository: AMReX-Fluids/AMReX-Hydro
         path: AMReX-Hydro
     - name: Checkout AMReX
       uses: actions/checkout@v3

.github/workflows/hip.yml

@@ -13,7 +13,7 @@ concurrency:
 
 jobs:
   hip_no_eb_3d:
-    if: ${{ github.repository == 'AMReX-Codes/incflo' || github.event_name != 'schedule' }}
+    if: ${{ github.repository == 'AMReX-Fluids/incflo' || github.event_name != 'schedule' }}
     name: HIP NO EB 3D
     runs-on: ubuntu-20.04
     env: {CXXFLAGS: "-Werror -Wall -Wextra -Wpedantic -Wnull-dereference -Wfloat-conversion -Wshadow -Woverloaded-virtual -Wextra-semi -Wunreachable-code -Wnon-virtual-dtor -Wno-deprecated-declarations -Wno-gnu-zero-variadic-macro-arguments"}
@@ -25,7 +25,7 @@ jobs:
     - name: Checkout AMReX-Hydro
       uses: actions/checkout@v3
       with:
-        repository: AMReX-Codes/AMReX-Hydro
+        repository: AMReX-Fluids/AMReX-Hydro
         path: AMReX-Hydro
     - name: Checkout AMReX
       uses: actions/checkout@v3

.github/workflows/sycl.yml

@@ -13,7 +13,7 @@ concurrency:
 
 jobs:
   sycl_eb_2d:
-    if: ${{ github.repository == 'AMReX-Codes/incflo' || github.event_name != 'schedule' }}
+    if: ${{ github.repository == 'AMReX-Fluids/incflo' || github.event_name != 'schedule' }}
     name: SYCL EB 2D
     runs-on: ubuntu-latest
     env: {CXXFLAGS: "-Werror -Wall -Wextra -Wpedantic -Wnull-dereference -Wfloat-conversion -Wshadow -Woverloaded-virtual -Wextra-semi -Wunreachable-code -Wnon-virtual-dtor -Wno-sign-compare -Wno-missing-braces"}
@@ -25,7 +25,7 @@ jobs:
     - name: Checkout AMReX-Hydro
       uses: actions/checkout@v3
       with:
-        repository: AMReX-Codes/AMReX-Hydro
+        repository: AMReX-Fluids/AMReX-Hydro
         path: AMReX-Hydro
     - name: Checkout AMReX
       uses: actions/checkout@v3

CMakeLists.txt

@@ -2,7 +2,7 @@ cmake_minimum_required(VERSION 3.20.0)
 
 project( incflo
    #VERSION 1.0
-   HOMEPAGE_URL "https://amrex-codes.github.io/incflo/"
+   HOMEPAGE_URL "https://amrex-fluids.github.io/incflo/"
    DESCRIPTION "An adaptive mesh, variable-density incompressible Navier-Stokes solver with no subcycling in time"
    LANGUAGES C CXX)
 

CONTRIBUTING.md

@@ -51,14 +51,14 @@ your fork.
 `development` on the main incflo repository.
 
 First, let us setup your local git repo. To make your own fork of the main
-repository, press the fork button on the [incflo Github page](https://github.com/AMReX-Codes/incflo).
+repository, press the fork button on the [incflo Github page](https://github.com/AMReX-Fluids/incflo).
 
 Then, clone incflo on your local computer. If you plan on doing a lot of incflo development,
 we recommend configuring your clone to use ssh access so you won't have to enter your Github
 password every time, which you can do using these commands:
 
 ```
-git clone [email protected]:AMReX-Codes/incflo.git
+git clone [email protected]:AMReX-Fluids/incflo.git
 cd incflo
 
 # Add your own fork.
@@ -78,7 +78,7 @@ machine, see
 If you instead prefer to use HTTPS authentication, configure your local clone as follows:
 
 ```
-git clone https://github.com/AMReX-Codes/incflo.git
+git clone https://github.com/AMReX-Fluids/incflo.git
 cd incflo
 
 # Add your own fork.

Docs/README.md

@@ -1 +1 @@
-Online documentation is available at https://amrex-codes.github.io/incflo/docs_html/.
+Online documentation is available at https://amrex-fluids.github.io/incflo/docs_html/.

Docs/sphinx_documentation/source/Debugging.rst

@@ -68,4 +68,4 @@ files for different processes.  For example,
 Also see AMReX's documentation on :ref:`amrex:sec:basics:debugging` for further suggestions.
 
 If you believe you've encountered a bug or incorrect behavior in incflo, please report the issue
-on incflo's github page `here <https://github.com/AMReX-Codes/incflo/issues>`_ .
+on incflo's github page `here <https://github.com/AMReX-Fluids/incflo/issues>`_ .

Docs/sphinx_documentation/source/GettingStarted.rst

@@ -32,15 +32,15 @@ First, make sure that git is installed on your machine.
 
    .. code:: shell
 
-         git clone https://github.com/AMReX-Codes/AMReX-Hydro.git
+         git clone https://github.com/AMReX-Fluids/AMReX-Hydro.git
 
    This will create a folder called ``AMReX-Hydro/`` on your machine.
 
 #. Download the incflo repository by typing:
 
    .. code:: shell
 
-         git clone https://github.com/AMReX-Codes/incflo.git
+         git clone https://github.com/AMReX-Fluids/incflo.git
 
    This will create a folder called ``incflo/`` on your machine.
 
@@ -371,5 +371,3 @@ Visualizing the Results
 =======================
 
 Options for visualizing the data are discussed in the AMReX Documenation on :ref:`amrex:Chap:Visualization`.
-
-

Docs/sphinx_documentation/source/Introduction.rst

@@ -33,7 +33,6 @@ Key software and algorithmic features of incflo include:
 
 -  Plotfile format supported by AmrVis, VisIt, ParaView, and yt.
 
-The incflo source code can be found at https://github.com/AMReX-Codes/incflo/.
+The incflo source code can be found at https://github.com/AMReX-Fluids/incflo/.
 incflo heavily leverages AMReX (see https://amrex-codes.github.io/) which is supported by
 ECP as part of the AMReX Co-Design Center.
-

Docs/sphinx_documentation/source/conf.py

@@ -45,8 +45,8 @@ def get_incflo_version():
 
 intersphinx_mapping = {
     'amrex': ('https://amrex-codes.github.io/amrex/docs_html/', None),
-    'hydro': ('https://amrex-codes.github.io/amrex-hydro/docs_html/', None),
-    'iamr': ('https://amrex-codes.github.io/IAMR/', None)
+    'hydro': ('https://amrex-fluids.github.io/amrex-hydro/docs_html/', None),
+    'iamr': ('https://amrex-fluids.github.io/IAMR/', None)
      # 'incflo_tutorials': ('https://incflo-codes.github.io/incflo/tutorials_html/', None)
 }
 

Docs/sphinx_documentation/source/index.rst

@@ -8,7 +8,7 @@ the variable density incompressible Navier-Stokes equations in the presence
 of complex geometries.  It includes adaptive mesh refinement (AMR)
 but without subcycling in time.
 
-For an AMReX-based incompressible flow code with subcycling in time, please see `IAMR <https://amrex-codes.github.io/IAMR/>`_
+For an AMReX-based incompressible flow code with subcycling in time, please see `IAMR <https://amrex-fluids.github.io/IAMR/>`_
 
 Active development in incflo is ongoing in the development branch.
 
@@ -23,4 +23,3 @@ Active development in incflo is ongoing in the development branch.
    Fluids_Chapter
    EB
    Debugging
-

README.md

@@ -24,13 +24,13 @@ Clone AMReX from the official Git repository
 
 Clone AMReX-Hydro from the official Git repository
 ```shell
-> git clone [email protected]:AMReX-Codes/AMReX-Hydro.git
+> git clone [email protected]:AMReX-Fluids/AMReX-Hydro.git
 ```
 
 ## Build and run an example incflo problem
 Clone and build incflo
 ```shell
-> git clone [email protected]:AMReX-Codes/incflo.git
+> git clone [email protected]:AMReX-Fluids/incflo.git
 > cd incflo/test_3d
 > make -j4
 > mpirun -np 4 incflo3d.gnu.MPI.ex benchmark.channel_cylinder-x

test_3d/README.md

@@ -40,7 +40,7 @@ you. We assume REGTEST_SCRATCH is defined to point to this location.
     ```
     git clone https://github.com/AMReX-Codes/amrex.git ${REGTEST_SCRATCH}/amrex
     git clone https://github.com/AMReX-Codes/regression_testing.git ${REGTEST_SCRATCH}/regression_testing
-    git clone https://github.com/AMReX-Codes/incflo.git ${REGTEST_SCRATCH}/incflo
+    git clone https://github.com/AMReX-Fluids/incflo.git ${REGTEST_SCRATCH}/incflo
     ```
 
 3.  Move to the location where the tests will be built/run, create