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Merge pull request #186 from epatters/v0.7
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Release v0.7
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epatters authored Jul 3, 2020
2 parents bfbbf81 + 5a50221 commit bf1dadf
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50 changes: 25 additions & 25 deletions Manifest.toml
Original file line number Diff line number Diff line change
Expand Up @@ -22,33 +22,33 @@ version = "0.7.0"

[[ColorTypes]]
deps = ["FixedPointNumbers", "Random"]
git-tree-sha1 = "c73d9cfc2a9d8433dc77f5bff4bddf46b1d78c20"
git-tree-sha1 = "cd19496d8943326b752d1712afd6ab79c7514d28"
uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f"
version = "0.10.3"
version = "0.10.5"

[[Colors]]
deps = ["ColorTypes", "FixedPointNumbers", "InteractiveUtils", "Reexport"]
git-tree-sha1 = "2fdeb981ebcf52cd800ddb6a0aa5eac34153552d"
git-tree-sha1 = "5639e44833cfcf78c6a73fbceb4da75611d312cd"
uuid = "5ae59095-9a9b-59fe-a467-6f913c188581"
version = "0.12.0"
version = "0.12.3"

[[Compat]]
deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "SHA", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"]
git-tree-sha1 = "b0ae6133d365da2dbc88bc43d997b1b95c9df5f6"
git-tree-sha1 = "a6a8197ae253f2c1a22b2ae17c2dfaf5812c03aa"
uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
version = "3.9.1"
version = "3.13.0"

[[Compose]]
deps = ["Base64", "Colors", "DataStructures", "Dates", "IterTools", "JSON", "LinearAlgebra", "Measures", "Printf", "Random", "Requires", "UUIDs"]
git-tree-sha1 = "034174e607d254b8ca0853a1a9029b265114bf6c"
deps = ["Base64", "Colors", "DataStructures", "Dates", "IterTools", "JSON", "LinearAlgebra", "Measures", "Printf", "Random", "Requires", "Statistics", "UUIDs"]
git-tree-sha1 = "157b75f64c26f36b55b5456dff08e524e591ec8d"
uuid = "a81c6b42-2e10-5240-aca2-a61377ecd94b"
version = "0.8.2"
version = "0.9.0"

[[DataStructures]]
deps = ["InteractiveUtils", "OrderedCollections"]
git-tree-sha1 = "6166ecfaf2b8bbf2b68d791bc1d54501f345d314"
git-tree-sha1 = "edad9434967fdc0a2631a65d902228400642120c"
uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
version = "0.17.15"
version = "0.17.19"

[[Dates]]
deps = ["Printf"]
Expand All @@ -74,9 +74,9 @@ uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549"
version = "1.3.0"

[[FixedPointNumbers]]
git-tree-sha1 = "3ba9ea634d4c8b289d590403b4a06f8e227a6238"
git-tree-sha1 = "8fb797c37a3b7ced4327a05ac4ca0dd6a4f1ba92"
uuid = "53c48c17-4a7d-5ca2-90c5-79b7896eea93"
version = "0.8.0"
version = "0.8.1"

[[Inflate]]
git-tree-sha1 = "f5fc07d4e706b84f72d54eedcc1c13d92fb0871c"
Expand Down Expand Up @@ -119,9 +119,9 @@ uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb"

[[Libiconv_jll]]
deps = ["Libdl", "Pkg"]
git-tree-sha1 = "a06937d9aa48855f52484c9a77a2670158fa90e2"
git-tree-sha1 = "c9d4035d7481bcdff2babf5a55525a818ef8ed8f"
uuid = "94ce4f54-9a6c-5748-9c1c-f9c7231a4531"
version = "1.16.0+4"
version = "1.16.0+5"

[[LightGraphs]]
deps = ["ArnoldiMethod", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"]
Expand Down Expand Up @@ -184,15 +184,15 @@ version = "0.6.5"
uuid = "a63ad114-7e13-5084-954f-fe012c677804"

[[OrderedCollections]]
git-tree-sha1 = "12ce190210d278e12644bcadf5b21cbdcf225cd3"
git-tree-sha1 = "293b70ac1780f9584c89268a6e2a560d938a7065"
uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
version = "1.2.0"
version = "1.3.0"

[[Parsers]]
deps = ["Dates", "Test"]
git-tree-sha1 = "72c3451932513427caffbd8bab15643ad693804b"
git-tree-sha1 = "20ef902ea02f7000756a4bc19f7b9c24867c6211"
uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
version = "1.0.3"
version = "1.0.6"

[[Pkg]]
deps = ["Dates", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "UUIDs"]
Expand Down Expand Up @@ -266,9 +266,9 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

[[TimerOutputs]]
deps = ["Printf"]
git-tree-sha1 = "0cc8db57cb537191b02948d4fabdc09eb7f31f98"
git-tree-sha1 = "f458ca23ff80e46a630922c555d838303e4b9603"
uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f"
version = "0.5.5"
version = "0.5.6"

[[TranscodingStreams]]
deps = ["Random", "Test"]
Expand All @@ -285,12 +285,12 @@ uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5"

[[XML2_jll]]
deps = ["Libdl", "Libiconv_jll", "Pkg", "Zlib_jll"]
git-tree-sha1 = "6b2ffe6728bdba991da4fc1aa5980a53db46a23f"
git-tree-sha1 = "432d91f45e950f2f2bda5c0f4e2b938c14493af9"
uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a"
version = "2.9.9+5"
version = "2.9.10+1"

[[Zlib_jll]]
deps = ["Libdl", "Pkg"]
git-tree-sha1 = "33d31d2b2a24d2fdbc60633b68229ee462811c8b"
git-tree-sha1 = "622d8b6dc0c7e8029f17127703de9819134d1b71"
uuid = "83775a58-1f1d-513f-b197-d71354ab007a"
version = "1.2.11+13"
version = "1.2.11+14"
2 changes: 1 addition & 1 deletion Project.toml
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@ name = "Catlab"
uuid = "134e5e36-593f-5add-ad60-77f754baafbe"
license = "BSD2"
authors = ["Evan Patterson <[email protected]>"]
version = "0.6.2"
version = "0.7.0"

[deps]
AutoHashEquals = "15f4f7f2-30c1-5605-9d31-71845cf9641f"
Expand Down
113 changes: 54 additions & 59 deletions docs/Manifest.toml
Original file line number Diff line number Diff line change
Expand Up @@ -28,9 +28,9 @@ version = "0.5.0"

[[BinaryProvider]]
deps = ["Libdl", "Logging", "SHA"]
git-tree-sha1 = "428e9106b1ff27593cbd979afac9b45b82372b8c"
git-tree-sha1 = "ecdec412a9abc8db54c0efc5548c64dfce072058"
uuid = "b99e7846-7c00-51b0-8f62-c81ae34c0232"
version = "0.5.9"
version = "0.5.10"

[[Bzip2_jll]]
deps = ["Libdl", "Pkg"]
Expand All @@ -39,16 +39,16 @@ uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0"
version = "1.0.6+2"

[[Catlab]]
deps = ["AutoHashEquals", "Compat", "Compose", "DataStructures", "IterativeSolvers", "JSON", "LightGraphs", "LightXML", "LinearAlgebra", "LinearMaps", "LinearOperators", "Logging", "Match", "MetaGraphs", "Parameters", "Pkg", "Random", "Reexport", "Requires", "StaticArrays", "Statistics", "Test"]
deps = ["AutoHashEquals", "Compat", "Compose", "DataStructures", "IterativeSolvers", "JSON", "LightGraphs", "LightXML", "LinearAlgebra", "LinearMaps", "LinearOperators", "Logging", "Match", "MetaGraphs", "Pkg", "Random", "Reexport", "Requires", "SparseArrays", "StaticArrays", "Statistics", "Test"]
path = ".."
uuid = "134e5e36-593f-5add-ad60-77f754baafbe"
version = "0.6.2"
version = "0.7.0"

[[CodecBzip2]]
deps = ["Bzip2_jll", "Libdl", "TranscodingStreams"]
git-tree-sha1 = "2fee975d68f9a8b22187ae86e33c0829b30cf231"
git-tree-sha1 = "2e62a725210ce3c3c2e1a3080190e7ca491f18d7"
uuid = "523fee87-0ab8-5b00-afb7-3ecf72e48cfd"
version = "0.7.1"
version = "0.7.2"

[[CodecZlib]]
deps = ["TranscodingStreams", "Zlib_jll"]
Expand All @@ -58,27 +58,27 @@ version = "0.7.0"

[[ColorTypes]]
deps = ["FixedPointNumbers", "Random"]
git-tree-sha1 = "c73d9cfc2a9d8433dc77f5bff4bddf46b1d78c20"
git-tree-sha1 = "cd19496d8943326b752d1712afd6ab79c7514d28"
uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f"
version = "0.10.3"
version = "0.10.5"

[[Colors]]
deps = ["ColorTypes", "FixedPointNumbers", "InteractiveUtils", "Reexport"]
git-tree-sha1 = "1e9bba7984e78aa8cdeea7f9f7cc984ad4e4b1c7"
git-tree-sha1 = "5639e44833cfcf78c6a73fbceb4da75611d312cd"
uuid = "5ae59095-9a9b-59fe-a467-6f913c188581"
version = "0.12.2"
version = "0.12.3"

[[Compat]]
deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "SHA", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"]
git-tree-sha1 = "b0ae6133d365da2dbc88bc43d997b1b95c9df5f6"
git-tree-sha1 = "a6a8197ae253f2c1a22b2ae17c2dfaf5812c03aa"
uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
version = "3.9.1"
version = "3.13.0"

[[Compose]]
deps = ["Base64", "Colors", "DataStructures", "Dates", "IterTools", "JSON", "LinearAlgebra", "Measures", "Printf", "Random", "Requires", "UUIDs"]
git-tree-sha1 = "034174e607d254b8ca0853a1a9029b265114bf6c"
deps = ["Base64", "Colors", "DataStructures", "Dates", "IterTools", "JSON", "LinearAlgebra", "Measures", "Printf", "Random", "Requires", "Statistics", "UUIDs"]
git-tree-sha1 = "157b75f64c26f36b55b5456dff08e524e591ec8d"
uuid = "a81c6b42-2e10-5240-aca2-a61377ecd94b"
version = "0.8.2"
version = "0.9.0"

[[Convex]]
deps = ["AbstractTrees", "BenchmarkTools", "LinearAlgebra", "MathOptInterface", "OrderedCollections", "SparseArrays", "Test"]
Expand All @@ -88,9 +88,9 @@ version = "0.13.3"

[[DataStructures]]
deps = ["InteractiveUtils", "OrderedCollections"]
git-tree-sha1 = "6166ecfaf2b8bbf2b68d791bc1d54501f345d314"
git-tree-sha1 = "edad9434967fdc0a2631a65d902228400642120c"
uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
version = "0.17.15"
version = "0.17.19"

[[Dates]]
deps = ["Printf"]
Expand All @@ -106,15 +106,15 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"

[[DocStringExtensions]]
deps = ["LibGit2", "Markdown", "Pkg", "Test"]
git-tree-sha1 = "88bb0edb352b16608036faadcc071adda068582a"
git-tree-sha1 = "c5714d9bcdba66389612dc4c47ed827c64112997"
uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae"
version = "0.8.1"
version = "0.8.2"

[[Documenter]]
deps = ["Base64", "Dates", "DocStringExtensions", "InteractiveUtils", "JSON", "LibGit2", "Logging", "Markdown", "REPL", "Test", "Unicode"]
git-tree-sha1 = "395fa1554c69735802bba37d9e7d9586fd44326c"
git-tree-sha1 = "f3464968c65fc78846dad1c038c474a2c39bbb23"
uuid = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
version = "0.24.11"
version = "0.25.0"

[[FastClosures]]
git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef"
Expand All @@ -128,15 +128,15 @@ uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549"
version = "1.3.0"

[[FixedPointNumbers]]
git-tree-sha1 = "3ba9ea634d4c8b289d590403b4a06f8e227a6238"
git-tree-sha1 = "8fb797c37a3b7ced4327a05ac4ca0dd6a4f1ba92"
uuid = "53c48c17-4a7d-5ca2-90c5-79b7896eea93"
version = "0.8.0"
version = "0.8.1"

[[HTTP]]
deps = ["Base64", "Dates", "IniFile", "MbedTLS", "Sockets"]
git-tree-sha1 = "fe31f4ff144392ad8176f5c7c03cca6ba320271c"
git-tree-sha1 = "eca61b35cdd8cd2fcc5eec1eda766424a995b02f"
uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3"
version = "0.8.14"
version = "0.8.16"

[[Inflate]]
git-tree-sha1 = "f5fc07d4e706b84f72d54eedcc1c13d92fb0871c"
Expand Down Expand Up @@ -177,10 +177,10 @@ uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
version = "0.21.0"

[[JSONSchema]]
deps = ["BinaryProvider", "HTTP", "JSON"]
git-tree-sha1 = "b0a7f9328967df5213691d318a03cf70ea8c76b1"
deps = ["HTTP", "JSON", "ZipFile"]
git-tree-sha1 = "832a4d327d9dafdae55a6ecae04f9997c83615cc"
uuid = "7d188eb4-7ad8-530c-ae41-71a32a6d4692"
version = "0.2.0"
version = "0.3.0"

[[LaTeXStrings]]
git-tree-sha1 = "de44b395389b84fd681394d4e8d39ef14e3a2ea8"
Expand All @@ -196,9 +196,9 @@ uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb"

[[Libiconv_jll]]
deps = ["Libdl", "Pkg"]
git-tree-sha1 = "e5256a3b0ebc710dbd6da0c0b212164a3681037f"
git-tree-sha1 = "c9d4035d7481bcdff2babf5a55525a818ef8ed8f"
uuid = "94ce4f54-9a6c-5748-9c1c-f9c7231a4531"
version = "1.16.0+2"
version = "1.16.0+5"

[[LightGraphs]]
deps = ["ArnoldiMethod", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"]
Expand Down Expand Up @@ -230,9 +230,9 @@ version = "1.1.0"

[[Literate]]
deps = ["Base64", "JSON", "REPL"]
git-tree-sha1 = "7345603884151a5ef894fb85949a8a4faeae8e10"
git-tree-sha1 = "422133037d6dc5df9f9b97c2cb81fcd9e35ddffe"
uuid = "98b081ad-f1c9-55d3-8b20-4c87d4299306"
version = "2.4.0"
version = "2.5.0"

[[Logging]]
uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"
Expand All @@ -254,9 +254,9 @@ version = "1.1.0"

[[MathOptInterface]]
deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "JSON", "JSONSchema", "LinearAlgebra", "MutableArithmetics", "OrderedCollections", "SparseArrays", "Test", "Unicode"]
git-tree-sha1 = "27f2ef85879b8f1d144266ab44f076ba0dfbd8a1"
git-tree-sha1 = "cd2049c055c7d192a235670d50faa375361624ba"
uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee"
version = "0.9.13"
version = "0.9.14"

[[MathProgBase]]
deps = ["LinearAlgebra", "SparseArrays"]
Expand All @@ -272,9 +272,9 @@ version = "1.0.2"

[[MbedTLS_jll]]
deps = ["Libdl", "Pkg"]
git-tree-sha1 = "c83f5a1d038f034ad0549f9ee4d5fac3fb429e33"
git-tree-sha1 = "f85473aeb7a2561a5c58c06c4868971ebe2bcbff"
uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1"
version = "2.16.0+2"
version = "2.16.6+0"

[[Measures]]
git-tree-sha1 = "e498ddeee6f9fdb4551ce855a46f54dbd900245f"
Expand All @@ -292,26 +292,20 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804"

[[MutableArithmetics]]
deps = ["LinearAlgebra", "SparseArrays", "Test"]
git-tree-sha1 = "e1edd618a8f39d16f8595dd622a63b25f759cf8a"
git-tree-sha1 = "6cf09794783b9de2e662c4e8b60d743021e338d0"
uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0"
version = "0.2.9"
version = "0.2.10"

[[OrderedCollections]]
git-tree-sha1 = "12ce190210d278e12644bcadf5b21cbdcf225cd3"
git-tree-sha1 = "293b70ac1780f9584c89268a6e2a560d938a7065"
uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
version = "1.2.0"

[[Parameters]]
deps = ["OrderedCollections", "UnPack"]
git-tree-sha1 = "38b2e970043613c187bd56a995fe2e551821eb4a"
uuid = "d96e819e-fc66-5662-9728-84c9c7592b0a"
version = "0.12.1"
version = "1.3.0"

[[Parsers]]
deps = ["Dates", "Test"]
git-tree-sha1 = "72c3451932513427caffbd8bab15643ad693804b"
git-tree-sha1 = "20ef902ea02f7000756a4bc19f7b9c24867c6211"
uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
version = "1.0.3"
version = "1.0.6"

[[Pkg]]
deps = ["Dates", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "UUIDs"]
Expand Down Expand Up @@ -397,9 +391,9 @@ version = "3.1.0"

[[TimerOutputs]]
deps = ["Printf"]
git-tree-sha1 = "0cc8db57cb537191b02948d4fabdc09eb7f31f98"
git-tree-sha1 = "f458ca23ff80e46a630922c555d838303e4b9603"
uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f"
version = "0.5.5"
version = "0.5.6"

[[TranscodingStreams]]
deps = ["Random", "Test"]
Expand All @@ -411,22 +405,23 @@ version = "0.9.5"
deps = ["Random", "SHA"]
uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4"

[[UnPack]]
git-tree-sha1 = "bc9ef72a4a826740895bf2772b48c21f9a1c13a7"
uuid = "3a884ed6-31ef-47d7-9d2a-63182c4928ed"
version = "1.0.0"

[[Unicode]]
uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5"

[[XML2_jll]]
deps = ["Libdl", "Libiconv_jll", "Pkg", "Zlib_jll"]
git-tree-sha1 = "987c02a43fa10a491a5f0f7c46a6d3559ed6a8e2"
git-tree-sha1 = "432d91f45e950f2f2bda5c0f4e2b938c14493af9"
uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a"
version = "2.9.9+4"
version = "2.9.10+1"

[[ZipFile]]
deps = ["Libdl", "Printf", "Zlib_jll"]
git-tree-sha1 = "254975fef2fc526583bb9b7c9420fe66ffe09f2f"
uuid = "a5390f91-8eb1-5f08-bee0-b1d1ffed6cea"
version = "0.9.2"

[[Zlib_jll]]
deps = ["Libdl", "Pkg"]
git-tree-sha1 = "a2e0d558f6031002e380a90613b199e37a8565bf"
git-tree-sha1 = "622d8b6dc0c7e8029f17127703de9819134d1b71"
uuid = "83775a58-1f1d-513f-b197-d71354ab007a"
version = "1.2.11+10"
version = "1.2.11+14"

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