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upgrade tifffile #436
upgrade tifffile #436
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Great job figuring this out! Tentatively seems good, based on the logs of the Test job, but let's merge the result of this action into this feature branch before going ahead, to confirm the bug is fully resolved. |
…ate_2024-10-08_20-42 admin/requirements-update_2024-10-08_20-42
* update precommit * style changes with updated precommit * bandit skips * precommit * fix file checking * check if prior is str --------- Co-authored-by: Benjamin Morris <[email protected]>
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How does aicsimageio/bioio installation work now? Do we just use bioio?
@@ -2,23 +2,23 @@ | |||
# Please do not edit it manually. | |||
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aicscytoparam==0.1.12 | |||
aicsimageio==4.14.0 | |||
aicsimageio==4.11.0 |
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tifffile was upgraded but aicsimageio was downgraded? Also do we install both bioio and aicsimageio?
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cyto-dl just uses bioio, aicsimageio is a dependency of pyshtools
What does this PR do?
Previous tests were failing because the tifffile version in the test-requirements was too old. Regular installation worked, but for the sake of passing tests, this enforces the tifffile version.
Before submitting
pytest
command?pre-commit run -a
command?Did you have fun?
Make sure you had fun coding 🙃