Code

Ref segmentations#84

Code

Open

donovanr wants to merge 14 commits intomasterAllenCellModeling/pytorch_integrated_cell:masterfrom ref_segmentationsAllenCellModeling/pytorch_integrated_cell:ref_segmentationsCopy head branch name to clipboard

+13,002-188

Commits

Commits on Oct 1, 2020

• first try at ref segs + bce loss

  donovanr

  committed
  d86641b

  Copy full SHA for d86641b

Commits on Oct 21, 2020

• segmentation dp working

  donovanr

  committed
  dd2ac4b

  Copy full SHA for dd2ac4b

Commits on Feb 3, 2021

• main examples notebooks state

  donovanr

  committed
  8f7a22f

  Copy full SHA for 8f7a22f

• paper_plos_2020 notebook state

  donovanr

  committed
  9a7626b

  Copy full SHA for 9a7626b

• add / modify training scripts

  donovanr

  committed
  cd5d0ad

  Copy full SHA for cd5d0ad

• ignore pngs and nfs files

  donovanr

  committed
  4115e5b

  Copy full SHA for 4115e5b

• seg dp example

  donovanr

  committed
  68ac905

  Copy full SHA for 68ac905

• channelInds -> channel_names

  donovanr

  committed
  e7b966e

  Copy full SHA for e7b966e

• add ic_train_model_actk binscript

  donovanr

  committed
  5dd28b4

  Copy full SHA for 5dd28b4

• add ic_train_model_actk binscript

  donovanr

  committed
  a858dc2

  Copy full SHA for a858dc2

• add seg / actk dps

  donovanr

  committed
  6fd5a8f

  Copy full SHA for 6fd5a8f

• add bvae_ref_only model

  donovanr

  committed
  568a193

  Copy full SHA for 568a193

• add latent space notebook from master

  donovanr

  committed
  4674837

  Copy full SHA for 4674837

Commits on Feb 12, 2021

• actk model+dp loading

  donovanr

  committed
  5d370f8

  Copy full SHA for 5d370f8