You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Caching of discordant read pairs during SV identification to reduce lookups on bam file. This gives a speedup of about 2x on average, but likely better returns on samples with incredibly large numbers of SVs.
Optimizations to fetching of downsampled reads (alters results slightly as randomness of downsampled reads is updated)
Optimization to intersection detection implemented in AA. Results in a small speedup.
Add support for parsing of SV VCF generated in GRIDSS having extra column for normal.