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esmecata 0.6.4

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@ArnaudBelcour ArnaudBelcour released this 07 Mar 17:03
0.6.4
7dfdf1c
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ArnaudBelcour Arnaud Belcour
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Add

  • Function get_domain_or_superkingdom_from_ncbi_tax_database in esmecata.utils to check if domain is called domain or superkingdom in NCBI Taxonomy database.

Fix

  • Taxonomic rank superkingdom has been renamed to domain in recent version of the NCBI Taxonomy database. Fix several related issues in different parts of EsMeCaTa.
  • esmecata_gseapy was not working with results from esmecata precomputed due to missing proteome_tax_id.tsv in 2_annotation folder.
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