Skip to content

Commit

Permalink
Added in updated Yeo mrtrix LUT
Browse files Browse the repository at this point in the history
  • Loading branch information
adsouza committed Nov 21, 2024
1 parent f688029 commit e6d1919
Show file tree
Hide file tree
Showing 2 changed files with 257 additions and 0 deletions.
171 changes: 171 additions & 0 deletions resources/yeo2011-parcellations/Yeo2011_17N_split.txt
View file
Original file line number Diff line number Diff line change
@@ -0,0 +1,171 @@
# Lookup table for extracting the relevant grey matter parcellations from the Yeo 2011 17-network split-components parcellation

0 ??? Unknown 0 0 0 0

1 L.VS.Str 17Networks_LH_VisCent_Striate 120 18 134 0
2 L.VC.ExStr 17Networks_LH_VisCent_ExStr 120 18 135 0
3 L.VP.Str 17Networks_LH_VisPeri_Striate 255 0 0 0
3 L.VP.Str 17Networks_LH_VisPeri_StriCal 255 0 0 0

4 L.VP.ExStrInf 17Networks_LH_VisPeri_ExStrInf 255 0 1 0
5 L.VP.ExStrSup 17Networks_LH_VisPeri_ExStrSup 255 1 0 0
6 L.SMA 17Networks_LH_SomMotA 70 130 180 0
7 L.SMB.Cent 17Networks_LH_SomMotB_Cent 42 204 164 0
8 L.SMB.S2 17Networks_LH_SomMotB_S2 42 204 165 0
9 L.SMB.Ins 17Networks_LH_SomMotB_Ins 42 205 165 0
10 L.SMB.Aud 17Networks_LH_SomMotB_Aud 43 204 164 0
11 L.DAA.TempOcc 17Networks_LH_DorsAttnA_TempOcc 74 155 60 0
12 L.DAA.ParOcc 17Networks_LH_DorsAttnA_ParOcc 74 155 61 0
13 L.DAA.SPL 17Networks_LH_DorsAttnA_SPL 74 156 60 0
14 L.DAB.TempOcc 17Networks_LH_DorsAttnB_TempOcc 0 118 14 0
15 L.DAB.PostC 17Networks_LH_DorsAttnB_PostC 0 118 15 0
16 L.DAB.FEF 17Networks_LH_DorsAttnB_FEF 0 119 14 0
17 L.DAB.PrCv 17Networks_LH_DorsAttnB_PrCv 0 119 15 0
18 L.SVAA.ParOper 17Networks_LH_SalVentAttnA_ParOper 196 58 250 0
19 L.SVAA.PrCv 17Networks_LH_SalVentAttnA_PrCv 196 58 251 0
19 L.SVAA.PrCv 17Networks_LH_SalVentAttnA_FrOper 196 58 251 0

20 L.SVAA.Ins 17Networks_LH_SalVentAttnA_Ins 196 59 250 0
21 L.SVAA.ParMed 17Networks_LH_SalVentAttnA_ParMed 196 59 251 0
22 L.SVAA.FrMed 17Networks_LH_SalVentAttnA_FrMed 197 58 250 0
23 L.SVAB.IPL 17Networks_LH_SalVentAttnB_IPL 255 152 213 0
24 L.SVAB.PFCd 17Networks_LH_SalVentAttnB_PFCd 255 152 214 0
25 L.SVAB.PFCl 17Networks_LH_SalVentAttnB_PFCl 255 153 213 0
26 L.SVAB.PFCv 17Networks_LH_SalVentAttnB_PFCv 255 153 214 0
26 L.SVAB.PFCv 17Networks_LH_SalVentAttnB_Ins 255 153 214 0

27 L.SVAB.OFC 17Networks_LH_SalVentAttnB_OFC 255 152 212 0
28 L.SVAB.PFCmp 17Networks_LH_SalVentAttnB_PFCmp 255 151 213 0
29 L.L.TempPole 17Networks_LH_Limbic_TempPole 220 248 164 0
29 L.L.TempPole 17Networks_LH_LimbicA_TempPole 220 248 164 0

30 L.L.OFC 17Networks_LH_Limbic_OFC 122 135 50 0
30 L.L.OFC 17Networks_LH_LimbicB_OFC 122 135 50 0

31 L.CA.Temp 17Networks_LH_ContA_Temp 230 148 34 0
32 L.CA.IPS 17Networks_LH_ContA_IPS 230 148 35 0
33 L.CA.PFCd 17Networks_LH_ContA_PFCd 230 149 34 0
34 L.CA.PFCl 17Networks_LH_ContA_PFCl 230 149 35 0
35 L.CA.PFClv 17Networks_LH_ContA_PFClv 231 148 34 0
36 L.CA.Cinga 17Networks_LH_ContA_Cinga 231 148 35 0
36 L.CA.Cinga 17Networks_LH_ContA_Cingm 231 148 35 0

37 L.CB.Temp 17Networks_LH_ContB_Temp 135 50 74 0
38 L.CB.IPL 17Networks_LH_ContB_IPL 135 50 75 0
39 L.CB.PFCd 17Networks_LH_ContB_PFCd 135 51 74 0
40 L.CB.PFCl 17Networks_LH_ContB_PFCl 135 51 75 0
41 L.CB.PFClv 17Networks_LH_ContB_PFClv 136 50 74 0
42 L.CB.PFCmp 17Networks_LH_ContB_PFCmp 136 50 75 0
43 L.CC.pCun 17Networks_LH_ContC_pCun 119 140 176 0
44 L.CC.Cingp 17Networks_LH_ContC_Cingp 119 140 177 0
45 L.DA.IPL 17Networks_LH_DefaultA_IPL 255 255 0 0
46 L.DA.PFCd 17Networks_LH_DefaultA_PFCd 255 255 1 0
47 L.DA.PCC 17Networks_LH_DefaultA_PCC 255 254 0 0
47 L.DA.PCC 17Networks_LH_DefaultA_pCunPCC 255 254 0 0

48 L.DA.PFCm 17Networks_LH_DefaultA_PFCm 254 255 0 0
49 L.DB.Temp 17Networks_LH_DefaultB_Temp 205 62 78 0
50 L.DB.IPL 17Networks_LH_DefaultB_IPL 205 62 79 0
51 L.DB.PFCd 17Networks_LH_DefaultB_PFCd 205 63 78 0
52 L.DB.PFCl 17Networks_LH_DefaultB_PFCl 205 63 79 0
53 L.DB.PFCv 17Networks_LH_DefaultB_PFCv 206 62 78 0
54 L.DC.IPL 17Networks_LH_DefaultC_IPL 0 0 130 0
55 L.DC.Rsp 17Networks_LH_DefaultC_Rsp 0 0 131 0
56 L.DC.PHC 17Networks_LH_DefaultC_PHC 0 1 130 0
57 L.TempPar 17Networks_LH_TempPar 12 48 255 0

58 L.Cer Left-Cerebellum-Cortex 230 148 34 255

59 L.Th Left-Thalamus-Proper 0 118 14 255
60 L.Ca Left-Caudate 122 186 220 255
61 L.Pu Left-Putamen 236 13 176 255
62 L.Pa Left-Pallidum 12 48 255 255
63 L.Hi Left-Hippocampus 220 216 20 255
64 L.Am Left-Amygdala 103 255 255 255
65 L.Ac Left-Accumbens-area 255 165 0 255

66 R.Th Right-Thalamus-Proper 0 118 14 255
67 R.Ca Right-Caudate 122 186 220 255
68 R.Pu Right-Putamen 236 13 176 255
69 R.Pa Right-Pallidum 13 48 255 255
70 R.Hi Right-Hippocampus 220 216 20 255
71 R.Am Right-Amygdala 103 255 255 255
72 R.Ac Right-Accumbens-area 255 165 0 255

73 R.Cer Right-Cerebellum-Cortex 230 148 34 255

74 R.VC.Str 17Networks_RH_VisCent_Striate 120 19 134 0
75 R.VC.ExStr 17Networks_RH_VisCent_ExStr 120 19 135 0
76 R.VP.Str 17Networks_RH_VisPeri_Striate 255 1 1 0
76 R.VP.Str 17Networks_RH_VisPeri_StriCal 255 1 1 0


77 R.VP.ExStrinf 17Networks_RH_VisPeri_ExStrInf 254 0 0 0
78 R.VP.ExStrSup 17Networks_RH_VisPeri_ExStrSup 254 0 1 0
79 R.SMA 17Networks_RH_SomMotA 70 131 181 0
80 R.SMB.Cent 17Networks_RH_SomMotB_Cent 43 204 165 0
81 R.SMB.S2 17Networks_RH_SomMotB_S2 43 205 164 0
82 R.SMB.Ins 17Networks_RH_SomMotB_Ins 43 205 165 0
83 R.SMB.Aud 17Networks_RH_SomMotB_Aud 42 204 163 0
84 R.DAA.TempOcc 17Networks_RH_DorsAttnA_TempOcc 74 156 61 0
85 R.DAA.ParOcc 17Networks_RH_DorsAttnA_ParOcc 75 155 60 0
86 R.DAA.SPL 17Networks_RH_DorsAttnA_SPL 75 155 61 0
87 R.DAB.TempOcc 17Networks_RH_DorsAttnB_TempOcc 1 118 14 0
88 R.DAB.PostC 17Networks_RH_DorsAttnB_PostC 1 118 15 0
89 R.DAB.FEF 17Networks_RH_DorsAttnB_FEF 1 119 14 0
90 R.DAB.PrCv 17Networks_RH_DorsAttnB_PrCv 1 119 15 0
91 R.SVAA.ParOper 17Networks_RH_SalVentAttnA_ParOper 196 58 249 0
92 R.SVAA.PrC 17Networks_RH_SalVentAttnA_PrC 196 57 250 0
93 R.SVAA.PrCv 17Networks_RH_SalVentAttnA_PrCv 196 57 249 0
93 R.SVAA.PrCv 17Networks_RH_SalVentAttnA_FrOper 196 57 249 0

94 R.SVAA.Ins 17Networks_RH_SalVentAttnA_Ins 195 58 250 0
95 R.SVAA.ParMed 17Networks_RH_SalVentAttnA_ParMed 195 58 249 0
96 R.SVAA.FrMed 17Networks_RH_SalVentAttnA_FrMed 195 57 250 0
97 R.SVAB.IPL 17Networks_RH_SalVentAttnB_IPL 254 152 213 0
98 R.SVAB.PFCd 17Networks_RH_SalVentAttnB_PFCd 254 152 212 0
99 R.SVAB.PFCl 17Networks_RH_SalVentAttnB_PFCl 254 151 213 0
100 R.SVAB.PFClv 17Networks_RH_SalVentAttnB_PFClv 254 151 212 0
101 R.SVAB.PFCv 17Networks_RH_SalVentAttnB_PFCv 254 152 214 0
101 R.SVAB.PFCv 17Networks_RH_SalVentAttnB_Ins 254 152 214 0

102 R.SVAB.PFCmp 17Networks_RH_SalVentAttnB_PFCmp 254 153 213 0
103 R.SVAB.Cinga 17Networks_RH_SalVentAttnB_Cinga 255 151 212 0
104 R.L.TempPole 17Networks_RH_Limbic_TempPole 220 248 165 0
104 R.L.TempPole 17Networks_RH_LimbicA_TempPole 220 248 165 0


105 R.L.OFC 17Networks_RH_Limbic_OFC 122 135 51 0
105 R.L.OFC 17Networks_RH_LimbicB_OFC 122 135 51 0


106 R.CA.Temp 17Networks_RH_ContA_Temp 230 148 33 0
107 R.CA.IPS 17Networks_RH_ContA_IPS 230 147 34 0
108 R.CA.PFCd 17Networks_RH_ContA_PFCd 230 147 33 0
109 R.CA.PFCl 17Networks_RH_ContA_PFCl 229 148 34 0
110 R.CA.Cinga 17Networks_RH_ContA_Cinga 229 148 33 0
110 R.CA.Cinga 17Networks_RH_ContA_Cingm 229 148 33 0

111 R.CB.Temp 17Networks_RH_ContB_Temp 136 51 75 0
112 R.CB.IPL 17Networks_RH_ContB_IPL 135 50 73 0
113 R.CB.PFCld 17Networks_RH_ContB_PFCld 135 49 74 0
114 R.CB.PFClv 17Networks_RH_ContB_PFClv 135 49 73 0
115 R.CB.PFCmp 17Networks_RH_ContB_PFCmp 134 50 74 0
116 R.CC.pCun 17Networks_RH_ContC_pCun 119 141 176 0
117 R.CC.Cingp 17Networks_RH_ContC_Cingp 119 141 177 0
118 R.DA.Temp 17Networks_RH_DefaultA_Temp 254 255 1 0
119 R.DA.IPL 17Networks_RH_DefaultA_IPL 255 254 1 0
120 R.DA.PFCd 17Networks_RH_DefaultA_PFCd 255 255 2 0
121 R.DA.PCC 17Networks_RH_DefaultA_PCC 255 253 0 0
121 R.DA.PCC 17Networks_RH_DefaultA_pCunPCC 255 253 0 0

122 R.DA.PFCm 17Networks_RH_DefaultA_PFCm 253 255 0 0
123 R.DB.Temp 17Networks_RH_DefaultB_Temp 206 62 79 0
124 R.DB.AntTemp 17Networks_RH_DefaultB_AntTemp 206 63 78 0
125 R.DB.PFCd 17Networks_RH_DefaultB_PFCd 206 63 79 0
126 R.DB.PFCv 17Networks_RH_DefaultB_PFCv 205 62 77 0
127 R.DC.IPL 17Networks_RH_DefaultC_IPL 0 1 131 0
128 R.DC.Rsp 17Networks_RH_DefaultC_Rsp 1 0 130 0
129 R.DC.PHC 17Networks_RH_DefaultC_PHC 1 0 131 0
130 R.TempPar 17Networks_RH_TempPar 12 48 254 0

86 changes: 86 additions & 0 deletions resources/yeo2011-parcellations/Yeo2011_7N_split.txt
View file
Original file line number Diff line number Diff line change
@@ -0,0 +1,86 @@
# Lookup table for extracting the relevant grey matter parcellations from the Yeo 2011 7-network split-components parcellation

0 ??? Unknown 0 0 0 0

1 L.Vis 7Networks_LH_Vis 120 18 134 0
2 L.SM 7Networks_LH_SomMot 70 130 180 0
3 L.DA.Post 7Networks_LH_DorsAttn_Post 0 118 14 0
4 L.DA.FEF 7Networks_LH_DorsAttn_FEF 0 118 15 0
5 L.DA.PrCv 7Networks_LH_DorsAttn_PrCv 0 119 14 0
6 L.SVA.PO 7Networks_LH_SalVentAttn_ParOper 196 58 250 0
7 L.SVA.TO 7Networks_LH_SalVentAttn_TempOcc 196 58 251 0
8 L.SVA.FO 7Networks_LH_SalVentAttn_FrOper 196 59 250 0
8 L.SVA.FO 7Networks_LH_SalVentAttn_FrOperIns 196 59 250 0

9 L.SVA.PFCl 7Networks_LH_SalVentAttn_PFCl 196 59 251 0
10 L.SVA.Med 7Networks_LH_SalVentAttn_Med 197 58 250 0
11 L.L.OFC 7Networks_LH_Limbic_OFC 220 248 164 0
12 L.L.TP 7Networks_LH_Limbic_TempPole 220 248 165 0
13 L.C.Par 7Networks_LH_Cont_Par 230 148 34 0
14 L.C.Temp 7Networks_LH_Cont_Temp 230 148 35 0
15 L.C.PFCd 7Networks_LH_Cont_PFCd 230 149 34 0
16 L.C.PFCl 7Networks_LH_Cont_PFCl 230 149 35 0
17 L.C.OFC 7Networks_LH_Cont_OFC 231 148 34 0
18 L.C.PFCv 7Networks_LH_Cont_PFCv 231 148 35 0
19 L.C.pCun 7Networks_LH_Cont_pCun 231 149 34 0
20 L.C.Cing 7Networks_LH_Cont_Cing 231 149 35 0
21 L.C.PFCmp 7Networks_LH_Cont_PFCmp 230 148 33 0
22 L.D.Par 7Networks_LH_Default_Par 205 62 78 0
23 L.D.Temp 7Networks_LH_Default_Temp 205 62 79 0
24 L.D.PFC 7Networks_LH_Default_PFC 205 63 78 0
25 L.D.PCC 7Networks_LH_Default_PCC 205 63 79 0
25 L.D.PCC 7Networks_LH_Default_pCunPCC 205 63 79 0

26 L.D.PHC 7Networks_LH_Default_PHC 206 62 78 0

27 L.Cer Left-Cerebellum-Cortex 230 148 34 255

28 L.Th Left-Thalamus-Proper 0 118 14 255
29 L.Ca Left-Caudate 122 186 220 255
30 L.Pu Left-Putamen 236 13 176 255
31 L.Pa Left-Pallidum 12 48 255 255
32 L.Hi Left-Hippocampus 220 216 20 255
33 L.Am Left-Amygdala 103 255 255 255
34 L.Ac Left-Accumbens-area 255 165 0 255

35 R.Th Right-Thalamus-Proper 0 118 14 255
36 R.Ca Right-Caudate 122 186 220 255
37 R.Pu Right-Putamen 236 13 176 255
38 R.Pa Right-Pallidum 13 48 255 255
39 R.Hi Right-Hippocampus 220 216 20 255
40 R.Am Right-Amygdala 103 255 255 255
41 R.Ac Right-Accumbens-area 255 165 0 255

42 R.Cer Right-Cerebellum-Cortex 230 148 34 255

43 R.Vis 7Networks_RH_Vis 120 18 135 0
44 R.SM 7Networks_RH_SomMot 70 130 181 0
45 R.DA.Post 7Networks_RH_DorsAttn_Post 0 119 15 0
46 R.DA.FEF 7Networks_RH_DorsAttn_FEF 1 118 14 0
47 R.DA.PrCv 7Networks_RH_DorsAttn_PrCv 1 118 15 0
48 R.SVA.TOP 7Networks_RH_SalVentAttn_TempOccPar 197 58 251 0
49 R.SVA.PrC 7Networks_RH_SalVentAttn_PrC 197 59 250 0
50 R.SVA.FO 7Networks_RH_SalVentAttn_FrOper 197 59 251 0
50 R.SVA.FO 7Networks_RH_SalVentAttn_FrOperIns 197 59 251 0

51 R.SVA.PFCv 7Networks_RH_SalVentAttn_PFCv 196 58 249 0
52 R.SVA.PFCl 7Networks_RH_SalVentAttn_PFCl 196 57 250 0
53 R.SVA.Med 7Networks_RH_SalVentAttn_Med 196 57 249 0
54 R.L.OFC 7Networks_RH_Limbic_OFC 220 249 164 0
55 R.L.TP 7Networks_RH_Limbic_TempPole 220 249 165 0
56 R.C.Par 7Networks_RH_Cont_Par 230 147 34 0
57 R.C.Temp 7Networks_RH_Cont_Temp 230 147 33 0
58 R.C.PFCv 7Networks_RH_Cont_PFCv 229 148 34 0
59 R.C.PFCl 7Networks_RH_Cont_PFCl 229 148 33 0
60 R.C.pCun 7Networks_RH_Cont_pCun 229 147 34 0
61 R.C.Cing 7Networks_RH_Cont_Cing 229 147 33 0
62 R.C.PFCmp 7Networks_RH_Cont_PFCmp 230 148 36 0
63 R.D.Par 7Networks_RH_Default_Par 205 62 77 0
64 R.D.Temp 7Networks_RH_Default_Temp 205 61 78 0
65 R.D.PFCv 7Networks_RH_Default_PFCv 205 61 77 0
66 R.D.PFCm 7Networks_RH_Default_PFCm 204 62 78 0
66 R.D.PFCm 7Networks_RH_Default_PFCdPFCm 204 62 78 0

67 R.D.PCC 7Networks_RH_Default_PCC 204 62 77 0
67 R.D.PCC 7Networks_RH_Default_pCunPCC 204 62 77 0

0 comments on commit e6d1919

Please sign in to comment.