tests #878
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: tests | |
| on: | |
| push: | |
| branches-ignore: | |
| pull_request: | |
| branches: [ main ] | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| # Runs the workflow once per day at 3:15am | |
| schedule: | |
| - cron: '3 16 * * *' | |
| env: | |
| CACHE_NUMBER: 1 # increase to reset cache manually | |
| jobs: | |
| tests: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| branch_coverage: ${{ steps.pytest.outputs.coverage }} | |
| coverage_report: ${{ steps.pytest.outputs.report }} | |
| steps: | |
| - name: checkout repo content | |
| uses: actions/checkout@v2 | |
| - name: install-extra-deps | |
| uses: ./.github/actions/install-extra-deps | |
| - name: Setup Mambaforge | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| miniforge-variant: Mambaforge | |
| miniforge-version: latest | |
| activate-environment: fenicsxconcrete | |
| use-mamba: true | |
| - name: Set cache date | |
| run: echo "DATE=$(date +'%Y%m%d')" >> $GITHUB_ENV | |
| - uses: actions/cache@v2 | |
| with: | |
| path: "/usr/share/miniconda3/envs/fenicsxconcrete" | |
| key: conda-${{ hashFiles('environment.yml') }}-${{ env.DATE }}-${{ env.CACHE_NUMBER }} | |
| id: cache | |
| - name: Update environment | |
| run: mamba env update -n fenicsxconcrete -f environment.yml | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| - name: pytest | |
| id : pytest | |
| shell: bash -l {0} | |
| run: | | |
| cd $GITHUB_WORKSPACE | |
| # grab the coverage output and also print it to the screen | |
| coverage run -m pytest -s -W error::UserWarning | |
| coverage xml | |
| COVERAGE_REPORT=$(coverage report -m | tee /dev/stderr) | |
| # passing a multiline string to output to use it in next job | |
| echo "report<<EOF" >> $GITHUB_OUTPUT | |
| echo "$COVERAGE_REPORT" >> $GITHUB_OUTPUT | |
| echo "EOF" >> $GITHUB_OUTPUT | |
| # extract the percentage of the total coverage, e.g. `75%` | |
| COVERAGE_PCT=$(echo $COVERAGE_REPORT | grep -oP "TOTAL\s+\d+\s+\d+\s+(\d+%)" | grep -oP "\d+%") | |
| # get only the coverage number without the percentage symbol | |
| COVERAGE_NUM=$(echo $COVERAGE_PCT | grep -oP "\d+") | |
| # active branch name | |
| BRANCH_NAME=$(echo ${GITHUB_REF#refs/heads/}) | |
| # add them to the github env for later usage | |
| echo "COVERAGE_NUM=$(echo $COVERAGE_NUM)" >> $GITHUB_ENV | |
| echo "coverage=$(echo $COVERAGE_NUM)" >> $GITHUB_OUTPUT # to be used in next job | |
| echo "COVERAGE_PCT=$(echo $COVERAGE_PCT)" >> $GITHUB_ENV | |
| # removing all possible slashes in file names, they seem to appear during Pull Requests | |
| echo "BRANCH_NAME=$(echo $BRANCH_NAME | sed "s/\//_/g")" >> $GITHUB_ENV | |
| - name: execute example scripts | |
| shell: bash -l {0} | |
| run: | | |
| for file in docs/examples/*.py | |
| do | |
| python $file | |
| done | |
| - name: test docs | |
| shell: bash -l {0} | |
| run: | | |
| cd docs | |
| make html | |
| - name: Create Coverage Badge | |
| if: contains(env.BRANCH_NAME, 'main') | |
| uses: schneegans/[email protected] | |
| with: | |
| auth: ${{ secrets.GIST_TOKEN }} | |
| gistID: c10a5b6d0714b1fe2344eb60918e92f8 | |
| filename: fenicsxconcrete_${{ env.BRANCH_NAME }}_coverage.json | |
| label: coverage | |
| message: ${{ env.COVERAGE_PCT }} | |
| valColorRange: ${{ env.COVERAGE_PCT }} | |
| maxColorRange: 95 # value where ligth green starts | |
| minColorRange: 50 # value where red starts | |
| check_coverage: | |
| needs: tests | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: check coverage | |
| run: | | |
| # getting coverage number from output of first job for this branch | |
| BRANCH_COVERAGE=${{ needs.tests.outputs.branch_coverage }} | |
| echo "Coverage of current branch: $BRANCH_COVERAGE" | |
| declare -i int_branch_coverage=$BRANCH_COVERAGE | |
| # getting coverage number from gist for main branch | |
| MAIN_DATA=$(curl -s -X GET "https://gist.githubusercontent.com/eriktamsen/c10a5b6d0714b1fe2344eb60918e92f8/raw/fenicsxconcrete_main_coverage.json") | |
| MAIN_COVERAGE=$(echo $MAIN_DATA | grep -o -P 'message.{3,6}' | sed -e 's/"//g' | sed -e 's/://g' | sed -e 's/message//g' | sed -e 's/%//g' | sed -e 's/,//g') | |
| echo "Coverage of main branch: $MAIN_COVERAGE" | |
| declare -i int_main_coverage=$MAIN_COVERAGE | |
| # compute difference | |
| delta_coverage=$(( int_branch_coverage - int_main_coverage )) | |
| echo "Increase in coverage: $delta_coverage" | |
| echo "Coverage report:" | |
| echo "-----------------------------------------------------------------------------------------------" | |
| echo "${{ needs.tests.outputs.coverage_report }}" | |
| echo "-----------------------------------------------------------------------------------------------" | |
| if [[ $delta_coverage -lt 0 ]] | |
| then | |
| echo "The current branch has lower coverage than the main branch, please improve your code" | |
| exit 1 | |
| fi | |
| echo "Passing!!!" | |