Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
This pull request enhances
use_vignette_*()
to provide a version of the vignette suitable for use in a package. It emphasizes overall vignette structure (including package installation instructions, reference to the support site, etc) rather than the features offered by markdown or BiocStyle. Functions gain arguments (e.g.,authors = c(person(), person())
) for easy production of custom vignettes.It is partly in response to a Bioconductor community developer forum slack post.
The templating infrastructure under
inst/rmarkdown/templates/package_vignette
is a little complicated by the desire to provide a templated version for interactive use, and a complete version for RStudio interactive creation. A README.md file in that directory provides update instructions.