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BioinformaticsArchive

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  1. blasr blasr Public

    BLASR: The PacBio® long read aligner

    C++ 6 77

  2. tcr tcr Public

    Forked from imminfo/tcr

    An R package for T cell receptor repertoire advanced data analysis.

    R 3

  3. abyss abyss Public

    Forked from bcgsc/abyss

    de novo sequence assembler

    C++ 2

  4. POPBAM POPBAM Public

    POPBAM: Tools for Evolutionary Analysis of Short Read Sequence Alignments

    C 2 5

  5. khmer khmer Public

    Forked from dib-lab/khmer

    in-memory k-mer counting

    C 1

  6. PhosCalc PhosCalc Public

    Forked from danmaclean/PhosCalc

    The Sainsbury Lab Tool for estimating the likelihood of phosphorylation at possible sites in a peptide from Mass Spec data

    Perl 1

Repositories

Showing 10 of 610 repositories
  • TIDAL Public Forked from laulabbrandeis/TIDAL

    Transposon Insertion and Depletion AnaLyzer

    BioinformaticsArchive/TIDAL’s past year of commit activity
    C 1 8 0 0 Updated Oct 17, 2015
  • biocontext Public Forked from bergmanlab/biocontext

    BioContext is a text mining system for extracting information about molecular processes in biomedical articles.

    BioinformaticsArchive/biocontext’s past year of commit activity
    Java 1 1 0 0 Updated Oct 13, 2015
  • getm Public Forked from bergmanlab/getm

    GETM is a tool which is capable of extracting information about the expression of genes from biomedical literature

    BioinformaticsArchive/getm’s past year of commit activity
    Java 1 2 0 0 Updated Oct 13, 2015
  • linnaeus Public Forked from bergmanlab/linnaeus

    Species name recognition and normalization software.

    BioinformaticsArchive/linnaeus’s past year of commit activity
    Java 1 1 0 0 Updated Oct 13, 2015
  • abyss Public Forked from bcgsc/abyss

    de novo sequence assembler

    BioinformaticsArchive/abyss’s past year of commit activity
    C++ 2 115 0 0 Updated Oct 11, 2015
  • snpgenie Public Forked from chasewnelson/SNPGenie

    Perl software for estimating evolutionary parameters from pooled next-generation sequencing SNP data

    BioinformaticsArchive/snpgenie’s past year of commit activity
    Perl 1 GPL-3.0 37 0 0 Updated Oct 10, 2015
  • Roary Public Forked from andrewjpage/Roary

    Pan genome pipeline

    BioinformaticsArchive/Roary’s past year of commit activity
    Perl 0 190 0 0 Updated Oct 8, 2015
  • soapdenovo2 Public Forked from ISA-tools/soapdenovo2

    SOAPdenovo2 case study website

    BioinformaticsArchive/soapdenovo2’s past year of commit activity
    Shell 0 6 0 0 Updated Oct 8, 2015
  • QoRTs Public Forked from hartleys/QoRTs

    Quality of RNA-Seq Toolset

    BioinformaticsArchive/QoRTs’s past year of commit activity
    HTML 0 14 0 0 Updated Oct 5, 2015
  • nextflu Public Forked from blab/nextflu

    Real-time tracking of influenza evolution

    BioinformaticsArchive/nextflu’s past year of commit activity
    Python 1 AGPL-3.0 19 0 0 Updated Sep 28, 2015
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