This is a Brainlife App for generating BUAN bundle profile.
The App creates bundle profiles of the pathways and saves the information in HDF5 files. This app implements bundle profiles method presented in Bundle analytics, a computational framework for investigating the shapes and profiles of brain pathways across populations paper [1].
DIPY is publicly funded and for the sustainability of the project it is helpful to Acknowledge the use of the software. We kindly ask that you acknowledge the funding below in your publications and code reusing this code.
[1] Chandio, BQ., et al. Bundle analytics, a computational framework for investigating the shapes and profiles of brain pathways across populations. Scientific reports, 10, 17149 (2020).
You can see a list of Dipy Apps currently regsitered on Brainlife. Find the App that you'd like to run and click "Execute" tab to specify dataset that you'd like to run the App on.
To run this command, you can simply type:
singularity exec -e docker://brainlife/dipy:1.1.1 brainlife_buan_bundle_profile [your_args]
To see the documentation of all arguments, go to the following page
## Input
To see the documentation of all the arguments, follow this [link](https://dipy.org/documentation/1.2.0./reference_cmd/dipy_buan_profiles/).
## Output
All output files will be generated according to the passed arguments, as explained [here](https://dipy.org/documentation/1.2.0./reference_cmd/dipy_buan_profiles/).
This App requires singularity to run.