Added last batch of terms

Added measure function subclass: - hemodynamic response function Added hemodynamic response function subclass: - canonical hemodynamic response function Added volume unit subclass: - voxel Added voxel subclass: - seed voxel Added three-dimensional spatial region subclass: - seed region Brought in passive and cognitive process from MF and PATO and added it to the root of the ontology. Brought in biological_process subclass from GO: - multicellular organismal process. Brought in multicellular organismal process subclass from GO: - system process. Brought in system_process subclasses from GO: - nervous system process and circulatory system process. Brought in circulatory system process subclass from GO: - blood circulation. Added blood circulation subclass: - hemodynamic response. Added new defs, and assigned ID's within the range (e.g. MRIO_1000000) for each term. Added has_exact_synonyms for each term that has one.
Buffalo-Ontology-Group · Aug 15, 2024 · 09f9570 · 09f9570
1 parent fdab54f
commit 09f9570
Showing 1 changed file with 162 additions and 0 deletions.
diff --git a/src/ontology/MRIO-edit.owl b/src/ontology/MRIO-edit.owl
@@ -365,6 +365,16 @@
 
 
 
+    <!-- http://purl.obolibrary.org/obo/MF_0000008 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/MF_0000008">
+        <dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
+        <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-30T23:59:27Z</dc:date>
+        <rdfs:label xml:lang="en">cognitive process</rdfs:label>
+    </owl:Class>
+
+
+
     <!-- http://purl.obolibrary.org/obo/MRIO_0000341 -->
 
     <owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_0000341">
@@ -4970,6 +4980,93 @@ The values often belong to a group of pixels or voxels that share the same chara
 
 
 
+    <!-- http://purl.obolibrary.org/obo/MRIO_1000024 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000024">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000453"/>
+        <IAO_0000115>A measure function that models the temporal changes in brain blood flow and oxygenation in response to neural activity.</IAO_0000115>
+        <dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
+        <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T17:26:45Z</dc:date>
+        <oboInOwl:hasExactSynonym>HRF</oboInOwl:hasExactSynonym>
+        <rdfs:label xml:lang="en">hemodynamic response function</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/MRIO_1000025 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000025">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000024"/>
+        <IAO_0000115>A standard model of the hemodynamic response function (HRF) that represents the typical temporal changes in brain blood flow and oxygenation in response to neural activity, used as a reference in neuroimaging studies to interpret brain activation patterns.</IAO_0000115>
+        <dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
+        <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T17:27:39Z</dc:date>
+        <oboInOwl:hasExactSynonym>canonical HRF</oboInOwl:hasExactSynonym>
+        <rdfs:label xml:lang="en">canonical hemodynamic response function</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/MRIO_1000026 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000026">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/UO_0000095"/>
+        <IAO_0000115>A volume unit in a three-dimensional imaging system that represents a discrete cubic or rectangular portion of space.</IAO_0000115>
+        <dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
+        <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T17:38:57Z</dc:date>
+        <rdfs:label xml:lang="en">voxel</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/MRIO_1000027 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000027">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000026"/>
+        <IAO_0000115>A specific voxel selected as a starting point for examining or analyzing three-dimensional data.</IAO_0000115>
+        <dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
+        <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T17:39:07Z</dc:date>
+        <rdfs:label xml:lang="en">seed voxel</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/MRIO_1000028 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000028">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000028"/>
+        <IAO_0000115>A three-dimensional spatial region defined by a cluster of contiguous voxels used as the starting point for examining or analyzing three-dimensional data.</IAO_0000115>
+        <dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
+        <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T17:41:46Z</dc:date>
+        <rdfs:label xml:lang="en">seed region</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/MRIO_1000029 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000029">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0003327"/>
+        <IAO_0000115>An image data set in which all images are acquired or aligned within the same plane of reference.</IAO_0000115>
+        <dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
+        <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T18:08:58Z</dc:date>
+        <rdfs:label xml:lang="en">coplaner image data set</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/MRIO_1000050 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000050">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO:0008015"/>
+        <IAO_0000115>Blood circulation that is increased in the brain, in response to neural activity.</IAO_0000115>
+        <dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
+        <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-08-05T20:00:54Z</dc:date>
+        <oboInOwl:hasExactSynonym>HR</oboInOwl:hasExactSynonym>
+        <rdfs:label xml:lang="en">hemodynamic response</rdfs:label>
+    </owl:Class>
+
+
+
     <!-- http://purl.obolibrary.org/obo/MRIO_70c96d29_5436_43de_b9ac_d85cea3f2ead -->
 
     <owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_70c96d29_5436_43de_b9ac_d85cea3f2ead">
@@ -5109,6 +5206,16 @@ The values often belong to a group of pixels or voxels that share the same chara
 
 
 
+    <!-- http://purl.obolibrary.org/obo/PATO_0000764 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/PATO_0000764">
+        <dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
+        <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-30T23:59:13Z</dc:date>
+        <rdfs:label xml:lang="en">passive</rdfs:label>
+    </owl:Class>
+
+
+
     <!-- http://purl.obolibrary.org/obo/UBERON_0000955 -->
 
     <owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0000955"/>
@@ -5535,6 +5642,61 @@ The values often belong to a group of pixels or voxels that share the same chara
 
 
 
+    <!-- http://purl.obolibrary.org/obo/GO:0003008 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/GO:0003008">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO:0032501"/>
+        <dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
+        <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-08-05T19:59:46Z</dc:date>
+        <rdfs:label xml:lang="en">system process</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/GO:0003013 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/GO:0003013">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO:0003008"/>
+        <dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
+        <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-08-05T20:00:11Z</dc:date>
+        <rdfs:label xml:lang="en">circulatory system process</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/GO:0008015 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/GO:0008015">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO:0003013"/>
+        <dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
+        <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-08-05T20:00:33Z</dc:date>
+        <rdfs:label xml:lang="en">blood circulation</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/GO:0032501 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/GO:0032501">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0008150"/>
+        <dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
+        <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-08-05T19:59:16Z</dc:date>
+        <rdfs:label xml:lang="en">multicellular organismal process</rdfs:label>
+    </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/GO:0050877 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/GO:0050877">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO:0003008"/>
+        <dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
+        <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-08-05T20:04:03Z</dc:date>
+        <rdfs:label xml:lang="en">nervous system process</rdfs:label>
+    </owl:Class>
+
+
+
     <!-- http://www.geneontology.org/formats/oboInOwl#ObsoleteClass -->
 
     <owl:Class rdf:about="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>