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Made updates to existing terms
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Changed seed-based connectivity label to seed-based functional connectivity.

Edited task-based and resting state functional connectivity definitions (formed a better def).

Added has_exact_synonyms for multi-voxel pattern analysis (MVPA), region of interest analysis (ROI analysis), psychophysiological interaction approach (PPI approach).

modified defs to include acronyms.
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@AlexT01010100
AlexT01010100 committed Aug 15, 2024
1 parent b486d41 commit 86f821b
Showing 1 changed file with 10 additions and 7 deletions.
17 changes: 10 additions & 7 deletions src/ontology/MRIO-edit.owl
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Original file line number Diff line number Diff line change
Expand Up @@ -4998,7 +4998,7 @@ The values often belong to a group of pixels or voxels that share the same chara

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000013">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000011"/>
<IAO_0000115>A type of functional connectivity that measures consistent or stable correlations in brain activity between regions over a period of time during functional MRI.</IAO_0000115>
<IAO_0000115>A type of functional connectivity that measures consistent or stable correlations in brain activity between regions over a period of time during functional magnetic resonance imaging (fMRI).</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-29T18:09:46Z</dc:date>
<rdfs:label xml:lang="en">static functional connectivity</rdfs:label>
Expand All @@ -5010,7 +5010,7 @@ The values often belong to a group of pixels or voxels that share the same chara

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000014">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000011"/>
<IAO_0000115>A type of functional connectivity that measures temporal variations in connectivity patterns between brain regions over time during functional MRI.</IAO_0000115>
<IAO_0000115>A type of functional connectivity that measures temporal variations in connectivity patterns between brain regions over time during functional magnetic resonance imaging (fMRI).</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-29T18:11:26Z</dc:date>
<rdfs:label xml:lang="en">dynamic functional connectivity</rdfs:label>
Expand All @@ -5022,7 +5022,7 @@ The values often belong to a group of pixels or voxels that share the same chara

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000015">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000011"/>
<IAO_0000115>A type of functional connectivity that measures the functional connectivity between brain regions while subjects perform a specific task(s) during functional MRI.</IAO_0000115>
<IAO_0000115>A type of functional connectivity that assesses how brain regions interact with each other while a subject performs specific tasks during functional magnetic resonance imaging (fMRI).</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-29T18:16:41Z</dc:date>
<rdfs:label xml:lang="en">task-based functional connectivity</rdfs:label>
Expand All @@ -5034,7 +5034,7 @@ The values often belong to a group of pixels or voxels that share the same chara

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000016">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000011"/>
<IAO_0000115>A type of functional connectivity that measures the functional connectivity between brain regions while the subject is at rest during functional MRI.</IAO_0000115>
<IAO_0000115>A type of functional connectivity that evaluates the interactions between brain regions while the subject is at rest during functional magnetic resonance imaging (fMRI).</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-29T18:17:09Z</dc:date>
<rdfs:label xml:lang="en">resting state functional connectivity</rdfs:label>
Expand All @@ -5049,7 +5049,7 @@ The values often belong to a group of pixels or voxels that share the same chara
<IAO_0000115>A method used to investigate functional connectivity between brain regions using a predefined seed voxel or region.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-29T18:22:19Z</dc:date>
<rdfs:label xml:lang="en">seed-based connectivity</rdfs:label>
<rdfs:label xml:lang="en">seed-based functional connectivity</rdfs:label>
</owl:Class>


Expand All @@ -5061,6 +5061,7 @@ The values often belong to a group of pixels or voxels that share the same chara
<IAO_0000115>A method within functional MRI data set analysis that involves defining specific brain regions or areas of interest a priori and examining the neural activity within those regions.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-29T18:27:21Z</dc:date>
<oboInOwl:hasExactSynonym>ROI analysis</oboInOwl:hasExactSynonym>
<rdfs:label xml:lang="en">region of interest analysis</rdfs:label>
</owl:Class>

Expand All @@ -5073,6 +5074,7 @@ The values often belong to a group of pixels or voxels that share the same chara
<IAO_0000115>A type of functional MRI data set analysis that attempts to analyze the information present in patterns of activity rather than the response at individual voxels.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-29T18:27:45Z</dc:date>
<oboInOwl:hasExactSynonym>MVPA</oboInOwl:hasExactSynonym>
<rdfs:label xml:lang="en">multi-voxel pattern analysis</rdfs:label>
</owl:Class>

Expand All @@ -5082,7 +5084,7 @@ The values often belong to a group of pixels or voxels that share the same chara

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000020">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000017"/>
<IAO_0000115>A method used in seed-based connectivity that involves extracting the time course from a seed voxel, determined based on some a priori hypothesis, and computing its correlation with all the voxels across the brain.</IAO_0000115>
<IAO_0000115>A method used in seed-based functional connectivity that involves extracting the time course from a seed voxel, determined based on some a priori hypothesis, and computing its correlation with all the voxels across the brain.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-29T18:31:33Z</dc:date>
<rdfs:label xml:lang="en">seed voxel correlation: within-subjects</rdfs:label>
Expand All @@ -5094,7 +5096,7 @@ The values often belong to a group of pixels or voxels that share the same chara

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000021">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000017"/>
<IAO_0000115>A method used in seed-based connectivity where an estimate of activation (e.g., beta weights for a particular condition) is extracted for a particular region, then those values are entered into a whole-brain regression analysis across subjects.</IAO_0000115>
<IAO_0000115>A method within seed-based functional connectivity where an estimate of activation (e.g., beta weights for a particular condition) is extracted for a particular region, then those values are entered into a whole-brain regression analysis across subjects.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-29T18:32:13Z</dc:date>
<rdfs:label xml:lang="en">seed voxel correlation: between-subjects</rdfs:label>
Expand All @@ -5121,6 +5123,7 @@ The values often belong to a group of pixels or voxels that share the same chara
<IAO_0000115>A technique used in task-based functional connectivity to examine how connectivity between a seed region and other brain regions is modulated by task conditions. It involves adding an interaction term to the general linear model, which models the task and the time course of activity in the seed region.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-29T19:38:05Z</dc:date>
<oboInOwl:hasExactSynonym>PPI approach</oboInOwl:hasExactSynonym>
<rdfs:label xml:lang="en">psychophysiological interaction approach</rdfs:label>
</owl:Class>

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