circRNA DAQ

DAQ = Detection Annotation Quantification

This is a snakemake workflow to detect, annotate and quantify host and viral circular RNAs.

This circularRNA detection pipeline uses CIRCExplorer2 and CIRI2 in parallel to detect, quantify and annotate circRNAs. Here is a flowchart of v0.3.3:

For complete documentation with tutorial go here