Update setup.py #119
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: Python package | |
on: [push, pull_request, workflow_dispatch] | |
jobs: | |
build: | |
runs-on: ${{ matrix.os }} | |
strategy: | |
matrix: | |
python-version: ["3.7", "3.8", "3.9"] | |
os: [ubuntu-latest] | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python ${{ matrix.python-version }} on ${{ matrix.os }} | |
uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
pip install flake8 nose pep8 pyyaml | |
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
- name: Lint with flake8 | |
run: | | |
# stop the build if there are Python syntax errors or undefined names | |
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
- name: Install | |
run: | | |
python setup.py install | |
- name: Test with nosetests | |
run: | | |
export PYTHONHASHSEED=0 | |
nosetests -v tests/test_umi_tools.py |