prep release

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: smam
 Title: Statistical Modeling of Animal Movements
-Version: 0.5.3.9000
-Date: 2020-10-02
+Version: 0.5.4
+Date: 2020-10-10
 Authors@R: c(
     person("Chaoran", "Hu", email = "[email protected]", role = c("aut", "cre")),
     person("Vladimir", "Pozdnyakov", email = "[email protected]", role = "aut"),

NEWS.md

@@ -1,9 +1,11 @@
-# CHANGES IN smam VERSION 0.5.3.9000
+# CHANGES IN smam VERSION 0.5.4
 
 ## MINOR CHANGES
 
 * Modified `estVarMRME_Godambe` and `estVarMRME_pBootstrap`.
 
+* Added 'f109' data.
+
 
 # CHANGES IN smam VERSION 0.5.3, 0.5.2, 0.5.1
 

README.md

@@ -10,7 +10,7 @@ This README would normally document whatever steps are necessary to get this app
 
 * Statistical modeling of animal movements in R. Three statistcal models are provided by this package. They are moving-resting model with embedded Brownian motion^[1,2], moving-resting-handling model with embedded Brownian motion^[3] and Brownian motion with measurement error^[4]. A quick guide for this package is given as package vignette.
 
-* Version: 0.5.3.9000
+* Version: 0.5.4
 
 ### How do I get set up? ###
 

configure

@@ -1,6 +1,6 @@
 #! /bin/sh
 # Guess values for system-dependent variables and create Makefiles.
-# Generated by GNU Autoconf 2.69 for smam 0.5.3.9000.
+# Generated by GNU Autoconf 2.69 for smam 0.5.4.
 #
 #
 # Copyright (C) 1992-1996, 1998-2012 Free Software Foundation, Inc.
@@ -576,8 +576,8 @@ MAKEFLAGS=
 # Identity of this package.
 PACKAGE_NAME='smam'
 PACKAGE_TARNAME='smam'
-PACKAGE_VERSION='0.5.3.9000'
-PACKAGE_STRING='smam 0.5.3.9000'
+PACKAGE_VERSION='0.5.4'
+PACKAGE_STRING='smam 0.5.4'
 PACKAGE_BUGREPORT=''
 PACKAGE_URL=''
 
@@ -1171,7 +1171,7 @@ if test "$ac_init_help" = "long"; then
   # Omit some internal or obsolete options to make the list less imposing.
   # This message is too long to be a string in the A/UX 3.1 sh.
   cat <<_ACEOF
-\`configure' configures smam 0.5.3.9000 to adapt to many kinds of systems.
+\`configure' configures smam 0.5.4 to adapt to many kinds of systems.
 
 Usage: $0 [OPTION]... [VAR=VALUE]...
 
@@ -1232,7 +1232,7 @@ fi
 
 if test -n "$ac_init_help"; then
   case $ac_init_help in
-     short | recursive ) echo "Configuration of smam 0.5.3.9000:";;
+     short | recursive ) echo "Configuration of smam 0.5.4:";;
    esac
   cat <<\_ACEOF
 
@@ -1299,7 +1299,7 @@ fi
 test -n "$ac_init_help" && exit $ac_status
 if $ac_init_version; then
   cat <<\_ACEOF
-smam configure 0.5.3.9000
+smam configure 0.5.4
 generated by GNU Autoconf 2.69
 
 Copyright (C) 2012 Free Software Foundation, Inc.
@@ -1316,7 +1316,7 @@ cat >config.log <<_ACEOF
 This file contains any messages produced by compilers while
 running configure, to aid debugging if configure makes a mistake.
 
-It was created by smam $as_me 0.5.3.9000, which was
+It was created by smam $as_me 0.5.4, which was
 generated by GNU Autoconf 2.69.  Invocation command line was
 
   $ $0 $@
@@ -2270,7 +2270,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
 # report actual input values of CONFIG_FILES etc. instead of their
 # values after options handling.
 ac_log="
-This file was extended by smam $as_me 0.5.3.9000, which was
+This file was extended by smam $as_me 0.5.4, which was
 generated by GNU Autoconf 2.69.  Invocation command line was
 
   CONFIG_FILES    = $CONFIG_FILES
@@ -2323,7 +2323,7 @@ _ACEOF
 cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
 ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
 ac_cs_version="\\
-smam config.status 0.5.3.9000
+smam config.status 0.5.4
 configured by $0, generated by GNU Autoconf 2.69,
   with options \\"\$ac_cs_config\\"
 

configure.ac

@@ -1,5 +1,5 @@
 
-AC_INIT([smam], 0.5.3.9000)
+AC_INIT([smam], 0.5.4)
 
 ## Use gsl-config to find arguments for compiler and linker flags
 ##

cran-comments.md

@@ -4,7 +4,7 @@
 
 * win-builder (devel and release)
 
-* ubuntu 14.04 (on travis-ci), (devel, release, and oldrel)
+* ubuntu 16.04 (on travis-ci), (devel, release, and oldrel)
 
 
 ## R CMD check results
@@ -16,21 +16,18 @@ There were 2 NOTEs:
 
 Maintainer: ‘Chaoran Hu <[email protected]>’
 
-Days since last update: 1
-
 Uses the superseded package: ‘doSNOW’
 
 * checking for GNU extensions in Makefiles ... NOTE
 
   GNU make is a SystemRequirements.
 
 
-
 ## Downstream dependencies
 
 There are currently no downstream dependencies for this package.
 
 
 ## Newer Version of R package smam
 
-The R package smam 0.5.2 has already in CRAN. This is the next version of smam. The version number of this package is 0.5.3. I fixed more bugs in this version in order to avoid error in solaris system.
+The R package smam 0.5.3 has already in CRAN. This is the next version of smam. The version number of this package is 0.5.4.

inst/CITATION

@@ -5,13 +5,13 @@ citEntry(entry = "Manual",
          author = personList(as.person("Chaoran Hu"),
                              as.person("Vladimir Pozdnyakov"),
                              as.person("Jun Yan")),
-         note = "R package version 0.5.3.9000",
+         note = "R package version 0.5.4",
          year =	"2020",
          url = "https://github.com/ChaoranHu/smam",
 
          textVersion = paste("Hu, C., Pozdnyakov, V., Yan, J. (2020). smam:",
                              "Statistical Modeling of Animal Movement.",
-                             "R package version 0.5.3.9000",
+                             "R package version 0.5.4",
                              "https://github.com/ChaoranHu/smam")
 )