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[refactor] v1.3
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ChocoParrot committed Sep 13, 2021
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7 changes: 4 additions & 3 deletions README.md
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<a href="https://github.com/Chokyotager/ORFFinder"><img src="/images/ORFFinder.png" alt="banner" /></a>
</p>
<br />
<p>
<a href="https://pepy.tech/project/orffinder"><img src="https://pepy.tech/badge/orffinder" alt="Downloads" /></a>
</p>
</div>

[![Downloads](https://pepy.tech/badge/orffinder)](https://pepy.tech/project/orffinder)

# ORFFinder
ORFFinder in Python. Inspired by NCBI's version: https://www.ncbi.nlm.nih.gov/orffinder/

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```py
from Bio import SeqIO
import orffinder
from orffinder import orffinder

sequence = SeqIO.read("gene.fasta", "fasta")
orffinder.getORFs(sequence, minimum_length=75, remove_nested=True)
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4 changes: 2 additions & 2 deletions setup.py
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"License :: OSI Approved :: MIT License",
"Operating System :: OS Independent",
),
package_dir={"": "src/orffinder"},
packages=setuptools.find_packages(where="src/orffinder"),
package_dir={"": "src"},
packages=setuptools.find_packages(where="src"),
python_requires=">=3.6"
)

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