Merge branch 'hyschive:main' into autocomplete

doc/wiki/Runtime-Parameters-related/Runtime-Parameters:-All.md

@@ -292,7 +292,7 @@ For variables with `Default/Min/Max` labeled as `Depend`, click the parameter na
 | [[ OPT__OUTPUT_LORENTZ \| Runtime-Parameters:-Outputs#OPT__OUTPUT_LORENTZ ]]                         |               0 |            None |            None | output Lorentz factor [0] ##SRHD ONLY## |
 | [[ OPT__OUTPUT_MACH \| Runtime-Parameters:-Outputs#OPT__OUTPUT_MACH ]]                               |               0 |            None |            None | output mach number [0] ##HYDRO ONLY## |
 | [[ OPT__OUTPUT_MODE \| Runtime-Parameters:-Outputs#OPT__OUTPUT_MODE ]]                               |              -1 |               1 |               3 | (1=const step, 2=const dt, 3=dump table) -> edit "Input__DumpTable" for 3 |
-| [[ OPT__OUTPUT_PART \| Runtime-Parameters:-Outputs#OPT__OUTPUT_PART ]]                               |               0 |               0 |               7 | output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag) [0] |
+| [[ OPT__OUTPUT_PART \| Runtime-Parameters:-Outputs#OPT__OUTPUT_PART ]]                               |               0 |               0 |               8 | output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag, 8=entire box) [0] |
 | [[ OPT__OUTPUT_PAR_DENS \| Runtime-Parameters:-Outputs#OPT__OUTPUT_PAR_DENS ]]                       | PAR_OUTPUT_DENS_PAR_ONLY |               0 |               2 | output the particle or total mass density on grids: (0=off, 1=particle mass density, 2=total mass density) [1] ##OPT__OUTPUT_TOTAL ONLY## |
 | [[ OPT__OUTPUT_PAR_MESH \| Runtime-Parameters:-Outputs#OPT__OUTPUT_PAR_MESH ]]                       |          Depend |          Depend |          Depend | output the attributes of tracer particles mapped from mesh quantities -> edit "Input__Par_Mesh" [1] ##PARTICLE ONLY## |
 | [[ OPT__OUTPUT_PAR_MODE \| Runtime-Parameters:-Outputs#OPT__OUTPUT_PAR_MODE ]]                       |               0 |               0 |               2 | output the particle data: (0=off, 1=text-file, 2=C-binary) [0] ##PARTICLE ONLY## |

doc/wiki/Runtime-Parameters-related/Runtime-Parameters:-Outputs.md

@@ -54,9 +54,9 @@ data dump frequency.
 the HDF5 snapshots of GAMER.
 
 <a name="OPT__OUTPUT_PART"></a>
-* #### `OPT__OUTPUT_PART` &ensp; (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diagonal) &ensp; [0]
+* #### `OPT__OUTPUT_PART` &ensp; (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diagonal, 8=entire box) &ensp; [0]
     * **Description:**
-Output the data of a single line or slice in the text format.
+Output the data of a single line, slice, or entire box in the text format.
 Use [OUTPUT_PART_X](#OUTPUT_PART_X), [OUTPUT_PART_Y](#OUTPUT_PART_Y), and
 [OUTPUT_PART_Z](#OUTPUT_PART_Z) to specify the target coordinates.
 This output option is mainly for quick inspection for simple test problems

example/script/clean.sh

@@ -1,6 +1,6 @@
 rm -f Record__Note Record__Timing Record__TimeStep Record__PatchCount Record__Dump Record__MemInfo Record__L1Err \
       Record__Conservation Data* stderr stdout log XYslice* YZslice* XZslice* Xline* Yline* Zline* \
-      Diag* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
+      Diag* Box* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
       PowerSpec_* Particle_* nohup.out Record__Performance Record__TimingMPI_* \
       Record__ParticleCount Record__User Patch_* Record__NCorrUnphy FailedPatchGroup* *.pyc Record__LoadBalance Record__Center \
       GRACKLE_INFO Record__DivB Record__Hybrid

example/test_problem/ELBDM/DiskHeating/Input__Parameter

@@ -245,7 +245,7 @@ SPEC_INT_GHOST_BOUNDARY       4           # ghost boundary size for spectral int
 
 # data dump
 OPT__OUTPUT_TOTAL             1           # output the simulation snapshot: (0=off, 1=HDF5, 2=C-binary) [1]
-OPT__OUTPUT_PART              0           # output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag) [0]
+OPT__OUTPUT_PART              0           # output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag, 8=entire box) [0]
 OPT__OUTPUT_TEXT_FORMAT_FLT   %24.16e     # string format of floating-point variables in output text files [%24.16e]
 OPT__OUTPUT_USER              0           # output the user-specified data -> edit "Output_User.cpp" [0]
 OPT__OUTPUT_PAR_MODE          0           # output the particle data: (0=off, 1=text-file, 2=C-binary) [0] ##PARTICLE ONLY##

example/test_problem/ELBDM/DiskHeating/clean.sh

@@ -1,6 +1,6 @@
 rm -f Record__Note Record__Timing Record__TimeStep Record__PatchCount Record__Dump Record__MemInfo Record__L1Err \
       Record__Conservation Data* stderr stdout log XYslice* YZslice* XZslice* Xline* Yline* Zline* \
-      Diag* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
+      Diag* Box* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
       PowerSpec_* Particle_* nohup.out Record__Performance Record__TimingMPI_* \
       Record__ParticleCount Record__User Patch_* Record__NCorrUnphy FailedPatchGroup* *.pyc Record__LoadBalance Record__Center \
       GRACKLE_INFO Record__DivB Record__Hybrid

example/test_problem/ELBDM/DiskHeating/download_ic.sh

@@ -1,9 +1,17 @@
-filename=disk-heating-ic
+#!/bin/bash
 
-curl https://girder.hub.yt/api/v1/item/6645cffcff473673ea91b24d/download -o ${filename}.tgz
-tar -zxvf ${filename}.tgz
-rm ${filename}.tgz
-ln -s ${filename}/UM_IC_0.4_M7 UM_IC
-ln -s ${filename}/PAR_IC_0.4_M7_low_res DiskHeatingParticleIC
+LOCAL_FILENAME="disk-heating-ic"
+FILE_ID="677dd2d0999605c485c8de8f"
+FILE_SHA256="5c981ffe1f0cd85237b51e9e2872e8047dad8a87e0419575255e4c1d5d8cf17a"
 
+# 1 download
+curl https://hub.yt/api/v1/item/${FILE_ID}/download -o "${LOCAL_FILENAME}.tgz"
 
+# 2. compare sha256sum
+! [ `sha256sum ${LOCAL_FILENAME}.tgz | awk '{print $1}'` = "${FILE_SHA256}" ] && echo "File broken: ${LOCAL_FILENAME}.tgz"
+
+# 3. unzip and link
+tar -zxvf ${LOCAL_FILENAME}.tgz
+rm ${LOCAL_FILENAME}.tgz
+ln -s ${LOCAL_FILENAME}/UM_IC_0.4_M7 UM_IC
+ln -s ${LOCAL_FILENAME}/PAR_IC_0.4_M7_low_res DiskHeatingParticleIC

example/test_problem/ELBDM/ExtPot/Input__Parameter

@@ -144,7 +144,7 @@ SPEC_INT_TABLE_PATH           ./          # path to tables for spectral interpol
 
 # data dump
 OPT__OUTPUT_TOTAL             1           # output the simulation snapshot: (0=off, 1=HDF5, 2=C-binary) [1]
-OPT__OUTPUT_PART              7           # output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag) [0]
+OPT__OUTPUT_PART              7           # output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag, 8=entire box) [0]
 OPT__OUTPUT_USER              0           # output the user-specified data -> edit "Output_User.cpp" [0]
 OPT__OUTPUT_BASE              0           # only output the base-level data [0] ##OPT__OUTPUT_PART ONLY##
 OPT__OUTPUT_POT               1           # output gravitational potential [1] ##OPT__OUTPUT_TOTAL ONLY##

example/test_problem/ELBDM/ExtPot/clean.sh

@@ -1,6 +1,6 @@
 rm -f Record__Note Record__Timing Record__TimeStep Record__PatchCount Record__Dump Record__MemInfo Record__L1Err \
       Record__Conservation Data* stderr stdout log XYslice* YZslice* XZslice* Xline* Yline* Zline* \
-      Diag* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
+      Diag* Box* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
       PowerSpec_* Particle_* nohup.out Record__Performance Record__TimingMPI_* \
       Record__ParticleCount Record__User Patch_* Record__NCorrUnphy FailedPatchGroup* *.pyc Record__LoadBalance Record__Hybrid
 

example/test_problem/ELBDM/GaussianWavePacket/Input__Parameter

@@ -133,7 +133,7 @@ SPEC_INT_TABLE_PATH           ./          # path to tables for spectral interpol
 
 # data dump
 OPT__OUTPUT_TOTAL             0           # output the simulation snapshot: (0=off, 1=HDF5, 2=C-binary) [1]
-OPT__OUTPUT_PART              0           # output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag) [0]
+OPT__OUTPUT_PART              0           # output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag, 8=entire box) [0]
 OPT__OUTPUT_USER              1           # output the user-specified data -> edit "Output_User.cpp" [0]
 OPT__OUTPUT_PAR_MODE          0           # output the particle data: (0=off, 1=text-file, 2=C-binary) [0] ##PARTICLE ONLY##
 OPT__OUTPUT_BASEPS            0           # output the base-level power spectrum [0]

example/test_problem/ELBDM/GaussianWavePacket/clean.sh

@@ -1,6 +1,6 @@
 rm -f Record__Note Record__Timing Record__TimeStep Record__PatchCount Record__Dump Record__MemInfo Record__L1Err \
       Record__Conservation Data* stderr stdout log XYslice* YZslice* XZslice* Xline* Yline* Zline* \
-      Diag* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
+      Diag* Box* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
       PowerSpec_* Particle_* nohup.out Record__Performance Record__TimingMPI_* \
       Record__ParticleCount Record__User Patch_* Record__NCorrUnphy FailedPatchGroup* *.pyc Record__LoadBalance Record__Hybrid
 

example/test_problem/ELBDM/HaloMerger/Input__Parameter

@@ -186,7 +186,7 @@ SPEC_INT_TABLE_PATH           ./          # path to tables for spectral interpol
 
 # data dump
 OPT__OUTPUT_TOTAL             1           # output the simulation snapshot: (0=off, 1=HDF5, 2=C-binary) [1]
-OPT__OUTPUT_PART              4           # output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag) [0]
+OPT__OUTPUT_PART              4           # output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag, 8=entire box) [0]
 OPT__OUTPUT_USER              0           # output the user-specified data -> edit "Output_User.cpp" [0]
 OPT__OUTPUT_PAR_MODE          1           # output the particle data: (0=off, 1=text-file, 2=C-binary) [0] ##PARTICLE ONLY##
 OPT__OUTPUT_BASEPS            0           # output the base-level power spectrum [0]

example/test_problem/ELBDM/HaloMerger/clean.sh

@@ -1,5 +1,5 @@
 rm -f Record__Note Record__Timing Record__TimeStep Record__PatchCount Record__Dump Record__MemInfo Record__L1Err \
       Record__Conservation Data* stderr stdout log XYslice* YZslice* XZslice* Xline* Yline* Zline* \
-      Diag* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
+      Diag* Box* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
       PowerSpec_* Particle_* nohup.out Record__Performance Record__TimingMPI_* \
       Record__ParticleCount Record__User Patch_* Record__NCorrUnphy FailedPatchGroup* *.pyc Record__LoadBalance

example/test_problem/ELBDM/HaloMerger/download_ic.sh

@@ -1,8 +1,15 @@
-filename=HALO_IC_m22_1_Mh_4e9
-link=https://girder.hub.yt/api/v1/item/65e5251f1613cd89a1dfe902/download
+#!/bin/bash
 
+LOCAL_FILENAME="HALO_IC_m22_1_Mh_4e9"
+FILE_ID="677cc8db999605c485c8de83"
+FILE_SHA256="acbd85842de65ff2360c7f3a1d1101c6f4f8939f430c3f61b8bc5f6f9a72fe94"
 
-curl ${link} -o ${filename}
+# 1. download
+curl https://hub.yt/api/v1/item/${FILE_ID}/download -o "${LOCAL_FILENAME}"
 
-ln -s ${filename} HALO_IC_Halo1
-ln -s ${filename} HALO_IC_Halo2
+# 2. compare sha256sum
+! [ `sha256sum ${LOCAL_FILENAME} | awk '{print $1}'` = "${FILE_SHA256}" ] && echo "File broken: ${LOCAL_FILENAME}"
+
+# 3. link
+ln -s ${LOCAL_FILENAME} HALO_IC_Halo1
+ln -s ${LOCAL_FILENAME} HALO_IC_Halo2

example/test_problem/ELBDM/IsolatedHalo/Input__Parameter

@@ -185,7 +185,7 @@ SPEC_INT_TABLE_PATH           ./          # path to tables for spectral interpol
 
 # data dump
 OPT__OUTPUT_TOTAL             1           # output the simulation snapshot: (0=off, 1=HDF5, 2=C-binary) [1]
-OPT__OUTPUT_PART              0           # output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag) [0]
+OPT__OUTPUT_PART              0           # output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag, 8=entire box) [0]
 OPT__OUTPUT_USER              0           # output the user-specified data -> edit "Output_User.cpp" [0]
 OPT__OUTPUT_PAR_MODE          0           # output the particle data: (0=off, 1=text-file, 2=C-binary) [0] ##PARTICLE ONLY##
 OPT__OUTPUT_BASEPS            0           # output the base-level power spectrum [0]

example/test_problem/ELBDM/IsolatedHalo/clean.sh

@@ -1,5 +1,5 @@
 rm -f Record__Note Record__Timing Record__TimeStep Record__PatchCount Record__Dump Record__MemInfo Record__L1Err \
       Record__Conservation Data* stderr stdout log XYslice* YZslice* XZslice* Xline* Yline* Zline* \
-      Diag* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
+      Diag* Box* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
       PowerSpec_* Particle_* nohup.out Record__Performance Record__TimingMPI_* \
       Record__ParticleCount Record__User Patch_* Record__NCorrUnphy FailedPatchGroup* *.pyc Record__LoadBalance Record__Hybrid

example/test_problem/ELBDM/IsolatedHalo/download_ic.sh

@@ -1,8 +1,16 @@
-filename=UM_IC_run05-halo08-lv4
-link=https://use.yt/upload/d75aa595
+#!/bin/bash
 
-curl -L ${link} -o ${filename}.tgz
-tar -zxvf ${filename}.tgz
-rm ${filename}.tgz
+LOCAL_FILENAME="UM_IC_run05-halo08-lv4"
+FILE_ID="677cbad6999605c485c8de77"
+FILE_SHA256="7ed91ba48a9aec139e0574629b689090ae43496fb957c6822c7ec1bd1217e22e"
 
-ln -s ${filename} UM_IC
+# 1. download
+curl https://hub.yt/api/v1/item/${FILE_ID}/download -o "${LOCAL_FILENAME}.tgz"
+
+# 2. compare sha256sum
+! [ `sha256sum ${LOCAL_FILENAME}.tgz | awk '{print $1}'` = "${FILE_SHA256}" ] && echo "File broken: ${LOCAL_FILENAME}.tgz"
+
+# 3. unzip and link
+tar -zxvf ${LOCAL_FILENAME}.tgz
+rm ${LOCAL_FILENAME}.tgz
+ln -s ${LOCAL_FILENAME} UM_IC

example/test_problem/ELBDM/JeansInstabilityComoving/Input__Parameter

@@ -159,7 +159,7 @@ SPEC_INT_TABLE_PATH           ./          # path to tables for spectral interpol
 
 # data dump
 OPT__OUTPUT_TOTAL             1           # output the simulation snapshot: (0=off, 1=HDF5, 2=C-binary) [1]
-OPT__OUTPUT_PART              0           # output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag) [0]
+OPT__OUTPUT_PART              0           # output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag, 8=entire box) [0]
 OPT__OUTPUT_USER              1           # output the user-specified data -> edit "Output_User.cpp" [0]
 OPT__OUTPUT_BASEPS            0           # output the base-level power spectrum [0]
 OPT__OUTPUT_BASE              0           # only output the base-level data [0] ##OPT__OUTPUT_PART ONLY##

example/test_problem/ELBDM/JeansInstabilityComoving/clean.sh

@@ -1,6 +1,6 @@
 rm -f Record__Note Record__Timing Record__TimeStep Record__PatchCount Record__Dump Record__MemInfo Record__L1Err \
       Record__Conservation Data* stderr stdout log XYslice* YZslice* XZslice* Xline* Yline* Zline* \
-      Diag* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
+      Diag* Box* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
       PowerSpec_* Particle_* nohup.out Record__Performance Record__TimingMPI_* \
       Record__ParticleCount Record__User Patch_* Record__NCorrUnphy FailedPatchGroup* *.pyc Record__LoadBalance Record__Hybrid
 

example/test_problem/ELBDM/LSS/Input__Parameter

@@ -171,7 +171,7 @@ SPEC_INT_TABLE_PATH           ./          # path to tables for spectral interpol
 
 # data dump
 OPT__OUTPUT_TOTAL             1           # output the simulation snapshot: (0=off, 1=HDF5, 2=C-binary) [1]
-OPT__OUTPUT_PART              0           # output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag) [0]
+OPT__OUTPUT_PART              0           # output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag, 8=entire box) [0]
 OPT__OUTPUT_USER              0           # output the user-specified data -> edit "Output_User.cpp" [0]
 OPT__OUTPUT_PAR_MODE          0           # output the particle data: (0=off, 1=text-file, 2=C-binary) [0] ##PARTICLE ONLY##
 OPT__OUTPUT_BASEPS            1           # output the base-level power spectrum [0]

example/test_problem/ELBDM/LSS/clean.sh

@@ -1,5 +1,5 @@
 rm -f Record__Note Record__Timing Record__TimeStep Record__PatchCount Record__Dump Record__MemInfo Record__L1Err \
       Record__Conservation Data* stderr stdout log XYslice* YZslice* XZslice* Xline* Yline* Zline* \
-      Diag* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
+      Diag* Box* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
       PowerSpec_* Particle_* nohup.out Record__Performance Record__TimingMPI_* \
       Record__ParticleCount Record__User Patch_* Record__NCorrUnphy FailedPatchGroup* *.pyc Record__LoadBalance Record__Hybrid

example/test_problem/ELBDM/LSS/download_ic.sh

@@ -1,5 +1,14 @@
-filename=Music_InitCondition_z3200_L1.4_N0256_s1002
-link=https://use.yt/upload/4dec54c9
+#!/bin/bash
 
-curl -L ${link} -o ${filename}
-ln -s ${filename} UM_IC
+LOCAL_FILENAME="Music_InitCondition_z3200_L1.4_N0256_s1002"
+FILE_ID="6780d8d6999605c485c8dea0"
+FILE_SHA256="114fd2a0d37e70ba7bd06907c878bd1c752ea76882ad1833af165696eef8cf9d"
+
+# 1. download
+curl https://hub.yt/api/v1/item/${FILE_ID}/download -o "${LOCAL_FILENAME}"
+
+# 2. compare sha256sum
+! [ `sha256sum ${LOCAL_FILENAME} | awk '{print $1}'` = "${FILE_SHA256}" ] && echo "File broken: ${LOCAL_FILENAME}"
+
+# 3. link
+ln -s ${LOCAL_FILENAME} UM_IC

example/test_problem/ELBDM/LSS_Hybrid/Input__Parameter

@@ -182,7 +182,7 @@ SPEC_INT_GHOST_BOUNDARY       4           # ghost boundary size for spectral int
 
 # data dump
 OPT__OUTPUT_TOTAL             1           # output the simulation snapshot: (0=off, 1=HDF5, 2=C-binary) [1]
-OPT__OUTPUT_PART              0           # output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag) [0]
+OPT__OUTPUT_PART              0           # output a single line or slice: (0=off, 1=xy, 2=yz, 3=xz, 4=x, 5=y, 6=z, 7=diag, 8=entire box) [0]
 OPT__OUTPUT_USER              0           # output the user-specified data -> edit "Output_User.cpp" [0]
 OPT__OUTPUT_PAR_MODE          0           # output the particle data: (0=off, 1=text-file, 2=C-binary) [0] ##PARTICLE ONLY##
 OPT__OUTPUT_BASEPS            1           # output the base-level power spectrum [0]

example/test_problem/ELBDM/LSS_Hybrid/clean.sh

@@ -1,5 +1,5 @@
 rm -f Record__Note Record__Timing Record__TimeStep Record__PatchCount Record__Dump Record__MemInfo Record__L1Err \
       Record__Conservation Data* stderr stdout log XYslice* YZslice* XZslice* Xline* Yline* Zline* \
-      Diag* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
+      Diag* Box* BaseXYslice* BaseYZslice* BaseXZslice* BaseXline* BaseYline* BaseZline* BaseDiag* \
       PowerSpec_* Particle_* nohup.out Record__Performance Record__TimingMPI_* \
       Record__ParticleCount Record__User Patch_* Record__NCorrUnphy FailedPatchGroup* *.pyc Record__LoadBalance Record__Hybrid

example/test_problem/ELBDM/LSS_Hybrid/download_heavy_halo_ic.sh

@@ -1,7 +1,16 @@
-filename=Music_InitCondition_z99_L2.8_N0256_HeavyHalo
-link=https://use.yt/upload/4587e2e6
+#!/bin/bash
 
-curl -L ${link} -o ${filename}
-ln -sf ${filename} UM_IC_wave_heavy
+LOCAL_FILENAME="Music_InitCondition_z100_L2.8_N0256_HeavyHalo"
+FILE_ID="6780d9d2999605c485c8dea9"
+FILE_SHA256="2f15920763e6189abd81b6f39fd283ebeeb6b6b90dbbce0eb898d098ef4b497d"
+
+# 1. download
+curl https://hub.yt/api/v1/item/${FILE_ID}/download -o "${LOCAL_FILENAME}"
+
+# 2. compare sha256sum
+! [ `sha256sum ${LOCAL_FILENAME} | awk '{print $1}'` = "${FILE_SHA256}" ] && echo "File broken: ${LOCAL_FILENAME}"
+
+# 3. link
+ln -sf ${LOCAL_FILENAME} UM_IC_wave_heavy
 python3 elbdm_wave_to_hybrid_IC.py -input UM_IC_wave_heavy -output UM_IC_hybrid_heavy -resolution 256
 ln -sf UM_IC_hybrid_heavy UM_IC

example/test_problem/ELBDM/LSS_Hybrid/download_light_halo_ic.sh

@@ -1,9 +1,20 @@
-filename=Music_InitCondition_z99_L2.8_N0064_LightHalo
-link=https://use.yt/upload/a67d8dd1
+#!/bin/bash
 
+LOCAL_FILENAME="Music_InitCondition_z100_L2.8_N0064_LightHalo"
+FILE_ID="6780d97e999605c485c8dea6"
+FILE_SHA256="89e1626405e38e3bd756167e3c06719f193456aa8e7d210ddfd13246df0e1a91"
+
+# 1. clean
 rm UM_IC*
-curl -L ${link} -o ${filename}
-python3 elbdm_rescale_periodic_IC.py -input ${filename} -output Music_InitCondition_z99_L2.8_N0256_LightHalo -n_in 64 -n_out 256
-ln -sf Music_InitCondition_z99_L2.8_N0256_LightHalo UM_IC_wave_light
+
+# 2. download
+curl https://hub.yt/api/v1/item/${FILE_ID}/download -o "${LOCAL_FILENAME}"
+
+# 3. compare sha256sum
+! [ `sha256sum ${LOCAL_FILENAME} | awk '{print $1}'` = "${FILE_SHA256}" ] && echo "File broken: ${LOCAL_FILENAME}"
+
+# 4. link
+python3 elbdm_rescale_periodic_IC.py -input ${LOCAL_FILENAME} -output Music_InitCondition_z100_L2.8_N0256_LightHalo -n_in 64 -n_out 256
+ln -sf Music_InitCondition_z100_L2.8_N0256_LightHalo UM_IC_wave_light
 python3 elbdm_wave_to_hybrid_IC.py -input UM_IC_wave_light -output UM_IC_hybrid_light -resolution 256
 ln -sf UM_IC_hybrid_light UM_IC