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Re-implement app as FastAPI#60

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willu47 merged 131 commits intomainClimateCompatibleGrowth/research_index:mainfrom developmentClimateCompatibleGrowth/research_index:developmentCopy head branch name to clipboardJan 2, 2025

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Commits

Commits on Nov 17, 2024

• added initial fastapi entry point

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• updated static files for fastapi support

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Commits on Nov 18, 2024

• added fastapi requirements

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• removed flask entry point

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• moved fastapi entry point to facilitate standard project structure

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• separated crud and db session functionality

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Commits on Nov 19, 2024

• fixed crud operations and updated function documentation

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Commits on Nov 20, 2024

• added author endpoints, crud and response schema

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• added country endpoints

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• added country endpoints

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• added output endpoints and schema

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• updated readme on how to run fastapi in dev mode

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• added workstream endpoints

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Commits on Nov 21, 2024

• partial consolidation of query return output and response schema for certain endpoints

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Commits on Nov 26, 2024

• implemented core module to handle app configuration

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• updated docker file to reflect fastapi migration

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• added docker compose

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• placeholder for nginx reverse proxy configuration

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• updated readme

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Commits on Nov 29, 2024

• Create an auto-deploy file

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• Update actions for deployment to dev and production

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• Update action

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• Use built container on docker

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• Remove source path

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• Try again with registry deployment

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• Deploy existing image (typo)

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• Ignore certain objects for docker container

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• Merge pull request #47 from ClimateCompatibleGrowth/dockerignore

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• Remove workflow for container app

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• Update workflows

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• Remove syntax errors

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• Add or update the App Service deployment workflow configuration from Azure Portal.

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• Delete old workflow

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• Fixed paths for docker registry

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• Merge pull request #45 from ClimateCompatibleGrowth/43-add-fastapi-endpoints

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• added calls to force https urls

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• Merge pull request #49 from ClimateCompatibleGrowth/48-fix-mixed-content-error-when-serving-static-files-over-https

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Commits on Dec 5, 2024

• Updated schema for outputs

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• Added schema for outputs metadata

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• Move author base to init to avoid circular imports

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• Added affiliation schema

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• Made id and name required

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• Fixed typo in key

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• Fix imports and limit country data returned

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• Fix circular imports from author

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• Update schemas in api endpoints

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• Use author schema in authormodel

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• Add topics to outputs

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• Apply new schemas

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• Add topic endpoints

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• Add unique identifier to topic

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• Remove unused ingest file

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• Lint: line length

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• Remove yagni popout

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• Output working

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• Now api author endpoints are working

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Commits on Dec 6, 2024

• Add country filter to output, make publication default result type

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Commits on Dec 9, 2024

• Docstrings updated

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• Don't include collaborators in the author list

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Commits on Dec 10, 2024

• Merge pull request #50 from ClimateCompatibleGrowth/schema

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• Add pagination to output list

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Commits on Dec 11, 2024

• removed non-working fix for https serving of static files

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• moved api endpoints to individual routes

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• Move filters and page selectors into output list

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Commits on Dec 12, 2024

• added missing topics endpoint to api router

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• Handle missing type in count dictionary

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• Add pagination to author page

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• Add pagination to author list

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• Remove debug print

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• Streamlined the author and meta schemas

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• Simplify country crud and use country query param on outputs

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• Smaller tidying of templates

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• Harmonised country api endpoint with HTML

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• Only return unique affiliations and worksreams

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• Only return unique affiliations and worksreams in author list

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• Show top five collaborators by result type

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• Merge pull request #53 from ClimateCompatibleGrowth/pagination

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• Add pagination to author page

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• remove unused imports

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• consolidated how the response models are used for endpoints and updated author router endpoint that lagged the previous dev merge commit

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• removed unused type imports

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Commits on Dec 15, 2024

• cgg_partner attribute not implemented in database so this has been made optional

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• refactored author endpoint and associated crud methods

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• updated country views

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• refactored api endpoints and associated crud methods

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• updated output views

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Commits on Dec 16, 2024

• fix to author crud output

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• updated country api endpoints and associated crud methods

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• updated workstream to incomplete implementation

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• add pydantic schema typing to crud methods

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Commits on Dec 17, 2024

• Minor fixes to serve html

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• Add pagination to api schemas

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• Fixed path to id

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• Fixed id lookup

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• Fix all routes, change type to result_type, fix js maps

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• Author list working with unified return from crud

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• Author detail working with unified return from crud

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• Output list working, author detail tweak

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• Fixed country api and html views

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• Merge pull request #58 from ClimateCompatibleGrowth/51-refactor-api-code-to-enable-re-use-of-queries-for-api-and-html-routes

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Commits on Dec 18, 2024

• Rename docker compose

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• Simplified docker compose and dockerfile

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• Fixed docker command path to main.py

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• Expose port 80

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• Replace orcid image with static file

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• Tried to fix logging

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• Make orcid symbol clickable in output list

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Commits on Dec 19, 2024

• Expose the port

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• Remove access logs argument

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• Fix dockerfile syntax booboo

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• Remove unused javascript

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• Configure logs to stream to console

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• Include the pagination template

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• Added workstreams

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• Completed rebase

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Commits on Dec 20, 2024

• Add workstream endpoints

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• Add workstream to navbar and make workstream badges clickable

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• Enable filter authors by workstream

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• Add filter sidebar to author list in workstreams

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• Add tests

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Commits on Jan 2, 2025

• Add tests for api, path and query type checking

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• Add models for query parameters

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• Added test for legal author uuid not found

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• Fixed uuid for author test

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• Merge pull request #63 from ClimateCompatibleGrowth/add_testing

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• Merge branch 'development' into workstream

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• Add workstream tests and query models to workstream api

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• Added tests for html response and error handling

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• Merge pull request #62 from ClimateCompatibleGrowth/workstream

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• Add result type to collaborators heading

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• Merge branch 'main' into development

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