change umi edit distance to 1

Clinical-Genomics · Aug 15, 2024 · a50ff90 · a50ff90
1 parent 154e52b
commit a50ff90
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/BALSAMIC/snakemake_rules/align/tga_bam_postprocess.rule b/BALSAMIC/snakemake_rules/align/tga_bam_postprocess.rule
@@ -33,7 +33,7 @@ export SENTIEON_LICENSE={params.sentieon_lic};
 -r {input.ref} \
 -i {input.bam} \
 --algo LocusCollector \
---umi_ecc_dist 0 \
+--umi_ecc_dist 1 \
 --consensus --umi_tag XR --fun score_info {output.score} ;
 
 {params.sentieon_exec} driver \