fix typos

Clinical-Genomics · Jan 15, 2025 · 3578d70 · 3578d70
1 parent 6887074
commit 3578d70
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Showing 3 changed files with 2 additions and 4 deletions.
diff --git a/cg/cli/workflow/nallo/base.py b/cg/cli/workflow/nallo/base.py
@@ -6,7 +6,6 @@
 
 from cg.cli.utils import CLICK_CONTEXT_SETTINGS
 
-from cg.cli.workflow.commands import resolve_compression
 from cg.cli.workflow.nf_analysis import config_case
 
 from cg.constants.constants import MetaApis
@@ -24,5 +23,4 @@ def nallo(context: click.Context) -> None:
     context.obj.meta_apis[MetaApis.ANALYSIS_API] = NalloAnalysisAPI(config=context.obj)
 
 
-nallo.add_command(resolve_compression)
 nallo.add_command(config_case)
diff --git a/tests/conftest.py b/tests/conftest.py
@@ -2118,7 +2118,7 @@ def context_config(
                 "account": "development",
                 "mail_user": email_address,
             },
-            "tower_workflow": "raredisease",
+            "tower_workflow": "nallo",
         },
         "raredisease": {
             "binary_path": nextflow_binary.as_posix(),

diff --git a/tests/meta/workflow/test_nallo.py b/tests/meta/workflow/test_nallo.py
@@ -18,7 +18,7 @@ def test_get_sample_sheet_content(
     patterns = [
         "ADM1",
         "m00000_000000_000000_s4.hifi_reads.bc2021.bam",
-        "nallo_case_enough_reads",
+        "nallo_case_two_samples",
     ]
 
     contains_pattern = any(