Add new qPCR EPP #750
Workflow file for this run
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name: Tests CI | |
on: ["pull_request"] | |
jobs: | |
tests-coverage: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Set up Python | |
uses: actions/setup-python@v2 | |
with: | |
python-version: 3.8 | |
- name: Check out limsmock | |
uses: actions/checkout@v2 | |
with: | |
repository: "Clinical-Genomics/limsmock" | |
- name: Install limsmock dependencies | |
run: | | |
python -m pip install --upgrade pip==21.1.2 | |
pip install -r requirements.txt -r requirements-dev.txt . | |
- name: Check out cg_lims | |
uses: actions/checkout@v2 | |
with: | |
repository: "Clinical-Genomics/cg_lims" | |
- name: Install cg_lims dependencies | |
run: | | |
pip install -r requirements.txt -r requirements-dev.txt . | |
- name: Install coveralls dependencies | |
run: | | |
pip install pytest-cov coveralls | |
- name: Test with pytest & Coveralls | |
run: | | |
pytest --cov=cg_lims/ | |
coveralls | |
env: | |
GITHUB: 1 | |
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
COVERALLS_REPO_TOKEN: ${{ secrets.COVERALLS_REPO_TOKEN }} |