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Patch calculate amount script for TWIST #445

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merged 2 commits into from
Nov 2, 2023
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Karl-Svard
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Fixed

  • Updated the source type name for cell free DNA

Steps to consider while deploying

  • Configuration changes:
  • Documentation updates:
  • Inform users by email:

Review:

  • Code approved by
  • Tests executed on stage by: (Document the test done with screen shots and description.)
  • "Merge and deploy" approved by

This version is a:

  • MAJOR - when you make incompatible API changes
  • MINOR - when you add functionality in a backwards compatible manner
  • PATCH - when you make backwards compatible bug fixes or documentation/instructions

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@amandaraud amandaraud left a comment

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nice fix!

@Karl-Svard Karl-Svard merged commit 134293c into master Nov 2, 2023
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@Karl-Svard Karl-Svard deleted the patch_calc_amount branch November 2, 2023 12:24
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Deployed

[karl.svard@clinical-lims ~]$ sudo -iu glsai
[sudo] password for karl.svard: 
-bash-4.2$ conda activate cg_lims
(cg_lims) -bash-4.2$ pip install -U "git+https://github.com/Clinical-Genomics/cg_lims@master"
Collecting git+https://github.com/Clinical-Genomics/cg_lims@master
  Cloning https://github.com/Clinical-Genomics/cg_lims (to revision master) to /tmp/pip-req-build-rizf8vb7
  Running command git clone -q https://github.com/Clinical-Genomics/cg_lims /tmp/pip-req-build-rizf8vb7
  Resolved https://github.com/Clinical-Genomics/cg_lims to commit 1e838a67b07789c2473afbb7fa9e413bcc9ae558
Building wheels for collected packages: cg-lims
  Building wheel for cg-lims (setup.py) ... done
  Created wheel for cg-lims: filename=cg_lims-6.14.7-py3-none-any.whl size=208190 sha256=6fdf5caaba3e371ab63ef971638ead95ad254509f034b5d4791380d4160bc715
  Stored in directory: /tmp/pip-ephem-wheel-cache-ysxd6pps/wheels/c5/64/ee/91a38557457cf80c2e79f05e70c7816fd72a1704981c623ff2
Successfully built cg-lims
Installing collected packages: cg-lims
  Attempting uninstall: cg-lims
    Found existing installation: cg-lims 6.14.4
    Uninstalling cg-lims-6.14.4:
      Successfully uninstalled cg-lims-6.14.4
Successfully installed cg-lims-6.14.7
(cg_lims) -bash-4.2$ 

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3 participants