Docker pull failed with exit code 1

Failed to install 'pathwayfindR' from local:

Process completed with exit code 1.

Failed to install 'pathwayfindR' from local:

Process completed with exit code 1.

No such keg: /opt/homebrew/Cellar/[email protected]

Malformed Depends or Suggests or Imports or Enhances field.

Failed to install 'pathwayfindR' from local:

Process completed with exit code 1.

Malformed Depends or Suggests or Imports or Enhances field.

Failed to install 'pathwayfindR' from local:

Process completed with exit code 1.

ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636

Request body: {"token":"","caller":{"name":"graphite-ci-action","version":"0.0.0"},"context":{"kind":"GITHUB_ACTIONS","repository":{"owner":"CogDisResLab","name":"pathwayfindR"},"sha":"ca7d4fdddb662839bf80792a7b5b54972c6e0cae","ref":"refs/heads/next","head_ref":"","run":{"workflow":"Continuous Integration / R Workflows","job":"optimize_ci","run":12441376134}}}

Response status: 400

CogDisResLab/pathwayfindR/undefined

Response returned a non-200 status. Skipping Graphite checks.

ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636

Docker pull failed with exit code 1, back off 8.022 seconds before retry.

Docker pull failed with exit code 1, back off 6.822 seconds before retry.

dependencies 'BiocVersion', 'BiocStyle' are not available

unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.5:

No files were found with the provided path: check. No artifacts will be uploaded.

pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf

HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!

unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:

unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.5:

unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:

unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:

harfbuzz 10.1.0 is already installed and up-to-date. To reinstall 10.1.0, run: brew reinstall harfbuzz

fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi

macOS's Gatekeeper has been disabled for this Cask