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MAINT: update lock files (#537)
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* DX: remove `files.watcherExclude`
* FIX: fetch all tags in benchmark workflow
* FIX: update type hints after QRules `Fraction` implementation
* MAINT: address Ruff linting and formatting errors
* MAINT: implement updates from pre-commit hooks
* MAINT: sort cSpell config

---------

Co-authored-by: GitHub <[email protected]>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
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3 people authored Dec 20, 2024
1 parent 5943fcc commit 5e8e7b0
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Showing 12 changed files with 1,430 additions and 997 deletions.
1 change: 1 addition & 0 deletions .cspell.json
Original file line number Diff line number Diff line change
Expand Up @@ -183,6 +183,7 @@
"yticks"
],
"language": "en-US",
"useGitignore": true,
"version": "0.2",
"words": [
"backends",
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6 changes: 3 additions & 3 deletions .github/workflows/benchmark.yml
Original file line number Diff line number Diff line change
Expand Up @@ -23,12 +23,12 @@ jobs:
runs-on: ubuntu-24.04
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- uses: actions/setup-python@v5
with:
python-version: "3.12"
- uses: astral-sh/setup-uv@v3
with:
enable-cache: true
- uses: astral-sh/setup-uv@v5
- name: Run pytest-benchmark
run: |
uv run \
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18 changes: 9 additions & 9 deletions .pre-commit-config.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -14,7 +14,7 @@ repos:
- id: check-useless-excludes

- repo: https://github.com/ComPWA/policy
rev: 0.5.6
rev: 0.5.8
hooks:
- id: check-dev-files
args:
Expand All @@ -33,7 +33,7 @@ repos:
- --extras-require=doc,jax,pwa,viz

- repo: https://github.com/kynan/nbstripout
rev: 0.8.0
rev: 0.8.1
hooks:
- id: nbstripout
args:
Expand Down Expand Up @@ -61,7 +61,7 @@ repos:
metadata.vscode
- repo: https://github.com/astral-sh/ruff-pre-commit
rev: v0.7.2
rev: v0.8.4
hooks:
- id: ruff
args: [--fix]
Expand Down Expand Up @@ -97,7 +97,7 @@ repos:
- id: trailing-whitespace

- repo: https://github.com/ComPWA/prettier-pre-commit
rev: v3.3.3
rev: v3.4.2
hooks:
- id: prettier

Expand All @@ -107,14 +107,14 @@ repos:
- id: taplo-format

- repo: https://github.com/pappasam/toml-sort
rev: v0.23.1
rev: v0.24.2
hooks:
- id: toml-sort
args:
- --in-place

- repo: https://github.com/python-jsonschema/check-jsonschema
rev: 0.29.4
rev: 0.30.0
hooks:
- id: check-jsonschema
name: Check CITATION.cff
Expand All @@ -127,7 +127,7 @@ repos:
pass_filenames: false

- repo: https://github.com/streetsidesoftware/cspell-cli
rev: v8.15.3
rev: v8.17.0
hooks:
- id: cspell

Expand All @@ -153,11 +153,11 @@ repos:
- python

- repo: https://github.com/ComPWA/pyright-pre-commit
rev: v1.1.388
rev: v1.1.391
hooks:
- id: pyright

- repo: https://github.com/astral-sh/uv-pre-commit
rev: 0.4.30
rev: 0.5.11
hooks:
- id: uv-lock
3 changes: 3 additions & 0 deletions .vscode/extensions.json
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Expand Up @@ -12,6 +12,8 @@
"ms-python.mypy-type-checker",
"ms-python.python",
"ms-python.vscode-pylance",
"ms-toolsai.jupyter",
"ms-toolsai.vscode-jupyter-cell-tags",
"ms-vscode.live-server",
"ms-vsliveshare.vsliveshare",
"redhat.vscode-yaml",
Expand All @@ -30,6 +32,7 @@
"ms-python.flake8",
"ms-python.isort",
"ms-python.pylint",
"ms-toolsai.vscode-jupyter-slideshow",
"travisillig.vscode-json-stable-stringify",
"tyriar.sort-lines"
]
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6 changes: 0 additions & 6 deletions .vscode/settings.json
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Expand Up @@ -33,12 +33,6 @@
"coverage-gutters.showLineCoverage": true,
"diffEditor.experimental.showMoves": true,
"editor.formatOnSave": true,
"files.watcherExclude": {
"**/*_cache/**": true,
"**/.eggs/**": true,
"**/.git/**": true,
"**/.tox/**": true
},
"git.rebaseWhenSync": true,
"github-actions.workflows.pinned.refresh.enabled": true,
"github-actions.workflows.pinned.workflows": [".github/workflows/ci.yml"],
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8 changes: 5 additions & 3 deletions benchmarks/ampform.py
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@@ -1,7 +1,8 @@
from __future__ import annotations

from collections.abc import Sequence
from pprint import pprint
from typing import TYPE_CHECKING
from typing import TYPE_CHECKING, Union

import numpy as np
import pytest
Expand All @@ -17,10 +18,9 @@
from tensorwaves.function.sympy import create_parametrized_function

if TYPE_CHECKING:
from collections.abc import Mapping, Sequence
from collections.abc import Mapping

from ampform.helicity import HelicityModel
from qrules.combinatorics import StateDefinition

from tensorwaves.function import ParametrizedBackendFunction
from tensorwaves.interface import (
Expand All @@ -31,6 +31,8 @@
ParametrizedFunction,
)

StateDefinition = Union[str, tuple[str, Sequence[float]]]


def formulate_amplitude_model(
formalism,
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2 changes: 1 addition & 1 deletion docs/conf.py
Original file line number Diff line number Diff line change
Expand Up @@ -215,7 +215,7 @@ def get_tensorflow_url() -> str:
"sympy": ("https://docs.sympy.org/latest", None),
"tensorflow": (get_tensorflow_url(), "tensorflow.inv"),
}
linkcheck_anchors = bool(os.environ.get("CI", False))
linkcheck_anchors = bool(os.environ.get("CI"))
linkcheck_anchors_ignore = [
r"pip\-installation\-gpu\-cuda",
]
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2 changes: 1 addition & 1 deletion pyproject.toml
Original file line number Diff line number Diff line change
Expand Up @@ -366,7 +366,7 @@ split-on-trailing-comma = false
"S301",
"S403",
"T20",
"TCH00",
"TC00",
]
"*docs/usage/faster-lambdify.ipynb" = [
"F401",
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10 changes: 5 additions & 5 deletions tests/optimizer/test_minuit.py
Original file line number Diff line number Diff line change
Expand Up @@ -20,8 +20,8 @@ def __init__(self, polynomial: Callable) -> None:
self.__polynomial = polynomial

def __call__(self, parameters: Mapping[str, ParameterValue]) -> float:
_x = parameters["x"]
return self.__polynomial(_x)
x = parameters["x"]
return self.__polynomial(x)

def gradient(
self, parameters: Mapping[str, ParameterValue]
Expand All @@ -34,9 +34,9 @@ def __init__(self, polynomial: Callable) -> None:
self.__polynomial = polynomial

def __call__(self, parameters: Mapping[str, ParameterValue]) -> float:
_x = parameters["x"]
_y = parameters["y"]
return self.__polynomial(_x, _y)
x = parameters["x"]
y = parameters["y"]
return self.__polynomial(x, y)

def gradient(
self, parameters: Mapping[str, ParameterValue]
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10 changes: 5 additions & 5 deletions tests/optimizer/test_scipy.py
Original file line number Diff line number Diff line change
Expand Up @@ -20,8 +20,8 @@ def __init__(self, polynomial: Callable) -> None:
self.__polynomial = polynomial

def __call__(self, parameters: Mapping[str, ParameterValue]) -> float:
_x = parameters["x"]
return self.__polynomial(_x)
x = parameters["x"]
return self.__polynomial(x)

def gradient(
self, parameters: Mapping[str, ParameterValue]
Expand All @@ -34,9 +34,9 @@ def __init__(self, polynomial: Callable) -> None:
self.__polynomial = polynomial

def __call__(self, parameters: Mapping[str, ParameterValue]) -> float:
_x = parameters["x"]
_y = parameters["y"]
return self.__polynomial(_x, _y)
x = parameters["x"]
y = parameters["y"]
return self.__polynomial(x, y)

def gradient(
self, parameters: Mapping[str, ParameterValue]
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4 changes: 2 additions & 2 deletions tests/test_estimator.py
Original file line number Diff line number Diff line change
Expand Up @@ -100,8 +100,8 @@ def phsp() -> DataSample:

@pytest.mark.parametrize("backend", ["jax", "numba", "numpy", "tf"])
def test_create_cached_function(backend):
__symbols: tuple[sp.Symbol, ...] = sp.symbols("a b c d x y")
a, b, c, d, x, y = __symbols
symbols: tuple[sp.Symbol, ...] = sp.symbols("a b c d x y")
a, b, c, d, x, y = symbols
expression = a * x + b * (c * x + d * y**2)
parameter_defaults = {a: -2.5, b: 1.4, c: 0.8, d: 3.7}

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