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use apptainer, not singularity
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@robkooper
robkooper committed Aug 26, 2024
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This folder contains utility scripts that are used on the HPC to monitor the queues and start models on the HPC.

*upload_download.sh* - This script will download and start 2 singulatiry containers (if not already started) and tail the output logs.
*upload_download.sh* - This script will download and start 2 apptainer containers (if not already started) and tail the output logs.
*model_launcher.sh* - This script will check if any models are needed to be run and start them. This will launch about 1 pipeline for every 10 waiting jobs.

Both scripts require a files called secrets.sh to be in the same folder. If it does not exist, it will print a message if it does not exist.

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