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Minor edits to trigger tests #435

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Jul 8, 2024
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Minor edits to trigger tests #435

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2 changes: 2 additions & 0 deletions pathml/preprocessing/workflows.py
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Original file line number Diff line number Diff line change
Expand Up @@ -41,6 +41,7 @@ def run_vectra_workflow(
# Store all slides in a SlideDataSet object
dataset = SlideDataset(vectra_list_A + vectra_list_B)

# initialize pipeline
pipe = Pipeline(
[
CollapseRunsCODEX(z=0),
Expand All @@ -54,6 +55,7 @@ def run_vectra_workflow(
]
)

# run pipeline
if use_parallel:
# Initialize a dask cluster using 10 workers. PathML pipelines can be run in distributed mode on
# cloud compute or a cluster using dask.distributed.
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