htslib fix

DecodeGenetics · Oct 18, 2023 · 03d7637 · 03d7637
1 parent b2d0c8f
commit 03d7637
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/CMakeLists.txt b/CMakeLists.txt
@@ -113,7 +113,7 @@ ExternalProject_Add(
     BUILD_IN_SOURCE 1
     SOURCE_DIR ${CMAKE_CURRENT_BINARY_DIR}/htslib
     PREFIX ${CMAKE_CURRENT_BINARY_DIR}/htslib
-    CONFIGURE_COMMAND cp -a ${CMAKE_CURRENT_SOURCE_DIR}/htslib ${CMAKE_CURRENT_BINARY_DIR}/ COMMAND autoheader COMMAND autoconf COMMAND ${CMAKE_CURRENT_BINARY_DIR}/htslib/configure --disable-libcurl --disable-gcs --with-libdeflate
+    CONFIGURE_COMMAND cp -a ${CMAKE_CURRENT_SOURCE_DIR}/htslib ${CMAKE_CURRENT_BINARY_DIR}/ COMMAND autoheader COMMAND autoreconf -i COMMAND ${CMAKE_CURRENT_BINARY_DIR}/htslib/configure --disable-libcurl --disable-gcs --with-libdeflate
         "CFLAGS=${MYCFLAGS} -g -Wall -O3 ${CMAKE_C_FLAGS} -I${CMAKE_CURRENT_BINARY_DIR}/libdeflate"
         "LDFLAGS=${MYLDFLAGS} -L${CMAKE_CURRENT_BINARY_DIR}/libdeflate"
         "CC=${CMAKE_C_COMPILER}"

diff --git a/paw b/paw