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XChem service to apply CHIMP detection for discovery of well center, crystal locatins and suggested drop target.

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DiamondLightSource/chimpflow

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chimpflow

Service which polls the database for subwell images which need to have the chimp detector run on them.

Uses xchembku for database interaction.

For documentation see: https://diamondlightsource.github.io/chimpflow

Model file for xchem-chimp

The model file is saved in::

https://gitlab.diamond.ac.uk/xchem/xchem-chimp-models

This file is too large for github.

For GitHub pytest to find the file in its CI/CD Actions, this file has been uploaded to zenodo:

https://zenodo.org/record/7810708/2022-12-07_CHiMP_Mask_R_CNN_XChem_50eph_VMXi_finetune_DICT_NZ.pytorch

The tests/conftest.py fetches this file automatically.

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XChem service to apply CHIMP detection for discovery of well center, crystal locatins and suggested drop target.

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