Added docker-compose for eoapi stac runtime (#115)

* Put more into .gitignore.

* Added docker-compose.

* Added python package handling with uv.

.gitignore

@@ -1 +1,42 @@
-venv/
+# Dependency directories
+node_modules/
+
+# General files for the project
+pkg/*
+*.pyc
+bin/*
+.project
+/.bin
+/_test/secrets/*.json
+
+# OSX leaves these everywhere on SMB shares
+._*
+
+# OSX trash
+.DS_Store
+.DS_STORE
+
+# Files generated by JetBrains IDEs, e.g. IntelliJ IDEA
+.idea/
+*.iml
+
+# Vscode files
+.vscode
+
+# Emacs save files
+*~
+\#*\#
+.\#*
+
+# Vim-related files
+[._]*.s[a-w][a-z]
+[._]s[a-w][a-z]
+*.un~
+Session.vim
+.netrwhist
+
+# Chart dependencies
+**/charts/*.tgz
+
+.history
+.venv/

runtimes/eoapi/stac/.env

@@ -0,0 +1,6 @@
+POSTGRES_USER=user
+POSTGRES_PASS=password
+POSTGRES_DBNAME=postgis
+POSTGRES_HOST_READER=localhost
+POSTGRES_HOST_WRITER=localhost
+POSTGRES_PORT=5432

runtimes/eoapi/stac/README.md

@@ -1,3 +1,22 @@
 ## eoapi.stac
 
-![](https://user-images.githubusercontent.com/10407788/151456592-f61ec158-c865-4d98-8d8b-ce05381e0e62.png)
+![](https://user-images.githubusercontent.com/10407788/151456592-f61ec158-c865-4d98-8d8b-ce05381e0e62.png)v
+
+### Installation
+
+Set the following environmental variables
+
+```bash
+- POSTGRES_USER=user
+- POSTGRES_PASS=password
+- POSTGRES_DBNAME=postgis
+- POSTGRES_HOST_READER=localhost
+- POSTGRES_HOST_WRITER=localhost
+- POSTGRES_PORT=5432
+```
+
+Run with `uv` to install dependencies and start the server:
+
+```bash
+uv run uvicorn eoapi.stac.app:app --host 0.0.0.0 --port 8081
+```

runtimes/eoapi/stac/docker-compose.yml

@@ -0,0 +1,43 @@
+version: '3'
+
+services:
+
+  stac-fastapi:
+    image: harbor.develop.eoepca.org/eoapi/stac:latest
+    ports:
+      - "${MY_DOCKER_IP:-127.0.0.1}:8081:8081"
+    environment:
+      # Postgres connection
+      - POSTGRES_USER=username
+      - POSTGRES_PASS=password
+      - POSTGRES_DBNAME=postgis
+      - POSTGRES_HOST_READER=database
+      - POSTGRES_HOST_WRITER=database
+      - POSTGRES_PORT=5432
+      - DB_MIN_CONN_SIZE=1
+      - DB_MAX_CONN_SIZE=1
+    depends_on:
+      - database
+    command:
+      bash -c "bash /tmp/scripts/wait-for-it.sh -t 120 -h database -p 5432 && uvicorn eoapi.stac.app:app --host 0.0.0.0 --port 8081"
+    volumes:
+      - ./scripts:/tmp/scripts
+
+  database:
+    image: ghcr.io/stac-utils/pgstac:v0.8.5
+    environment:
+      - POSTGRES_USER=username
+      - POSTGRES_PASSWORD=password
+      - POSTGRES_DB=postgis
+      - PGUSER=username
+      - PGPASSWORD=password
+      - PGDATABASE=postgis
+    ports:
+      - "${MY_DOCKER_IP:-127.0.0.1}:5439:5432"
+    command: postgres -N 500
+    volumes:
+      - ./.pgdata:/var/lib/postgresql/data
+
+networks:
+  default:
+    name: eoapi-network

runtimes/eoapi/stac/scripts/wait-for-it.sh

@@ -0,0 +1,186 @@
+#!/usr/bin/env bash
+# Use this script to test if a given TCP host/port are available
+
+######################################################
+# Copied from https://github.com/vishnubob/wait-for-it
+######################################################
+
+WAITFORIT_cmdname=${0##*/}
+
+echoerr() { if [[ $WAITFORIT_QUIET -ne 1 ]]; then echo "$@" 1>&2; fi }
+
+usage()
+{
+    cat << USAGE >&2
+Usage:
+    $WAITFORIT_cmdname host:port [-s] [-t timeout] [-- command args]
+    -h HOST | --host=HOST       Host or IP under test
+    -p PORT | --port=PORT       TCP port under test
+                                Alternatively, you specify the host and port as host:port
+    -s | --strict               Only execute subcommand if the test succeeds
+    -q | --quiet                Don't output any status messages
+    -t TIMEOUT | --timeout=TIMEOUT
+                                Timeout in seconds, zero for no timeout
+    -- COMMAND ARGS             Execute command with args after the test finishes
+USAGE
+    exit 1
+}
+
+wait_for()
+{
+    if [[ $WAITFORIT_TIMEOUT -gt 0 ]]; then
+        echoerr "$WAITFORIT_cmdname: waiting $WAITFORIT_TIMEOUT seconds for $WAITFORIT_HOST:$WAITFORIT_PORT"
+    else
+        echoerr "$WAITFORIT_cmdname: waiting for $WAITFORIT_HOST:$WAITFORIT_PORT without a timeout"
+    fi
+    WAITFORIT_start_ts=$(date +%s)
+    while :
+    do
+        if [[ $WAITFORIT_ISBUSY -eq 1 ]]; then
+            nc -z $WAITFORIT_HOST $WAITFORIT_PORT
+            WAITFORIT_result=$?
+        else
+            (echo -n > /dev/tcp/$WAITFORIT_HOST/$WAITFORIT_PORT) >/dev/null 2>&1
+            WAITFORIT_result=$?
+        fi
+        if [[ $WAITFORIT_result -eq 0 ]]; then
+            WAITFORIT_end_ts=$(date +%s)
+            echoerr "$WAITFORIT_cmdname: $WAITFORIT_HOST:$WAITFORIT_PORT is available after $((WAITFORIT_end_ts - WAITFORIT_start_ts)) seconds"
+            break
+        fi
+        sleep 1
+    done
+    return $WAITFORIT_result
+}
+
+wait_for_wrapper()
+{
+    # In order to support SIGINT during timeout: http://unix.stackexchange.com/a/57692
+    if [[ $WAITFORIT_QUIET -eq 1 ]]; then
+        timeout $WAITFORIT_BUSYTIMEFLAG $WAITFORIT_TIMEOUT $0 --quiet --child --host=$WAITFORIT_HOST --port=$WAITFORIT_PORT --timeout=$WAITFORIT_TIMEOUT &
+    else
+        timeout $WAITFORIT_BUSYTIMEFLAG $WAITFORIT_TIMEOUT $0 --child --host=$WAITFORIT_HOST --port=$WAITFORIT_PORT --timeout=$WAITFORIT_TIMEOUT &
+    fi
+    WAITFORIT_PID=$!
+    trap "kill -INT -$WAITFORIT_PID" INT
+    wait $WAITFORIT_PID
+    WAITFORIT_RESULT=$?
+    if [[ $WAITFORIT_RESULT -ne 0 ]]; then
+        echoerr "$WAITFORIT_cmdname: timeout occurred after waiting $WAITFORIT_TIMEOUT seconds for $WAITFORIT_HOST:$WAITFORIT_PORT"
+    fi
+    return $WAITFORIT_RESULT
+}
+
+# process arguments
+while [[ $# -gt 0 ]]
+do
+    case "$1" in
+        *:* )
+        WAITFORIT_hostport=(${1//:/ })
+        WAITFORIT_HOST=${WAITFORIT_hostport[0]}
+        WAITFORIT_PORT=${WAITFORIT_hostport[1]}
+        shift 1
+        ;;
+        --child)
+        WAITFORIT_CHILD=1
+        shift 1
+        ;;
+        -q | --quiet)
+        WAITFORIT_QUIET=1
+        shift 1
+        ;;
+        -s | --strict)
+        WAITFORIT_STRICT=1
+        shift 1
+        ;;
+        -h)
+        WAITFORIT_HOST="$2"
+        if [[ $WAITFORIT_HOST == "" ]]; then break; fi
+        shift 2
+        ;;
+        --host=*)
+        WAITFORIT_HOST="${1#*=}"
+        shift 1
+        ;;
+        -p)
+        WAITFORIT_PORT="$2"
+        if [[ $WAITFORIT_PORT == "" ]]; then break; fi
+        shift 2
+        ;;
+        --port=*)
+        WAITFORIT_PORT="${1#*=}"
+        shift 1
+        ;;
+        -t)
+        WAITFORIT_TIMEOUT="$2"
+        if [[ $WAITFORIT_TIMEOUT == "" ]]; then break; fi
+        shift 2
+        ;;
+        --timeout=*)
+        WAITFORIT_TIMEOUT="${1#*=}"
+        shift 1
+        ;;
+        --)
+        shift
+        WAITFORIT_CLI=("$@")
+        break
+        ;;
+        --help)
+        usage
+        ;;
+        *)
+        echoerr "Unknown argument: $1"
+        usage
+        ;;
+    esac
+done
+
+if [[ "$WAITFORIT_HOST" == "" || "$WAITFORIT_PORT" == "" ]]; then
+    echoerr "Error: you need to provide a host and port to test."
+    usage
+fi
+
+WAITFORIT_TIMEOUT=${WAITFORIT_TIMEOUT:-15}
+WAITFORIT_STRICT=${WAITFORIT_STRICT:-0}
+WAITFORIT_CHILD=${WAITFORIT_CHILD:-0}
+WAITFORIT_QUIET=${WAITFORIT_QUIET:-0}
+
+# Check to see if timeout is from busybox?
+WAITFORIT_TIMEOUT_PATH=$(type -p timeout)
+WAITFORIT_TIMEOUT_PATH=$(realpath $WAITFORIT_TIMEOUT_PATH 2>/dev/null || readlink -f $WAITFORIT_TIMEOUT_PATH)
+
+WAITFORIT_BUSYTIMEFLAG=""
+if [[ $WAITFORIT_TIMEOUT_PATH =~ "busybox" ]]; then
+    WAITFORIT_ISBUSY=1
+    # Check if busybox timeout uses -t flag
+    # (recent Alpine versions don't support -t anymore)
+    if timeout &>/dev/stdout | grep -q -e '-t '; then
+        WAITFORIT_BUSYTIMEFLAG="-t"
+    fi
+else
+    WAITFORIT_ISBUSY=0
+fi
+
+if [[ $WAITFORIT_CHILD -gt 0 ]]; then
+    wait_for
+    WAITFORIT_RESULT=$?
+    exit $WAITFORIT_RESULT
+else
+    if [[ $WAITFORIT_TIMEOUT -gt 0 ]]; then
+        wait_for_wrapper
+        WAITFORIT_RESULT=$?
+    else
+        wait_for
+        WAITFORIT_RESULT=$?
+    fi
+fi
+
+if [[ $WAITFORIT_CLI != "" ]]; then
+    if [[ $WAITFORIT_RESULT -ne 0 && $WAITFORIT_STRICT -eq 1 ]]; then
+        echoerr "$WAITFORIT_cmdname: strict mode, refusing to execute subprocess"
+        exit $WAITFORIT_RESULT
+    fi
+    exec "${WAITFORIT_CLI[@]}"
+else
+    exit $WAITFORIT_RESULT
+fi