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Interactively plot the image intensity along the depth axis of a 3D image dataset.

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EPFL-Center-for-Imaging/napari-z-plotter

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napari-z-plotter

In 2D view, click on an pixel to plot the intensity along the depth (Z) axis of a 3D image at that location.

This project is part of an ongoing collaboration between the EPFL Center for Imaging and the Bionanophotonic Systems Laboratory.

Authors

  • Mallory Wittwer (EPFL Center for Imaging)
  • Felix Richter (BIOS)

Installation

You can install napari-z-plotter via pip:

pip install napari-z-plotter

Usage

Select the plugin from the Plugins menu of Napari.

Contributing

Contributions are very welcome. Please get in touch if you'd like to be involved in improving or extending the package.

License

Distributed under the terms of the BSD-3 license, "napari-z-plotter" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.


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Interactively plot the image intensity along the depth axis of a 3D image dataset.

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