Update dependencies #1
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| on: | |
| push: | |
| branches: | |
| - master | |
| - migrant | |
| name: Deploy to ShinyApps | |
| jobs: | |
| Deploy: | |
| runs-on: ubuntu-22.04 | |
| name: Deploy to ShinyApps | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - name: Check out the repository | |
| uses: actions/checkout@v3 | |
| - name: Set up Node 19.9.0 | |
| uses: actions/setup-node@v3 | |
| with: | |
| node-version: '19.9.0' | |
| architecture: 'x64' | |
| cache: 'yarn' | |
| cache-dependency-path: 'Client/yarn.lock' | |
| - name: Build UI | |
| run: | | |
| npm install -g yarn | |
| yarn set version latest | |
| yarn install | |
| yarn build | |
| working-directory: Client | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: '4.2.3' | |
| use-public-rspm: true | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| dependencies: '"hard"' | |
| pak-version: devel | |
| extra-packages: | | |
| any::rsconnect | |
| any::pkgbuild | |
| any::rcmdcheck | |
| working-directory: Server | |
| - name: Install hivPlatform R package | |
| run: | | |
| pak::pkg_install('github::nextpagesoft/hivEstimatesAccuracy2/Server@migrant') | |
| shell: Rscript {0} | |
| working-directory: Server | |
| - name: Deploy | |
| env: | |
| SHINYAPPS_ACCOUNT: ${{ secrets.SHINYAPPS_ACCOUNT }} | |
| SHINYAPPS_TOKEN: ${{ secrets.SHINYAPPS_TOKEN }} | |
| SHINYAPPS_SECRET: ${{ secrets.SHINYAPPS_SECRET }} | |
| SHINYAPPS_APP_NAME: hivPlatform-${{ env.GITHUB_REF_NAME }} | |
| run: > | |
| rsconnect::setAccountInfo( | |
| name = Sys.getenv('SHINYAPPS_ACCOUNT'), | |
| token = Sys.getenv('SHINYAPPS_TOKEN'), | |
| secret = Sys.getenv('SHINYAPPS_SECRET') | |
| ); | |
| rsconnect::deployApp( | |
| account = Sys.getenv('SHINYAPPS_ACCOUNT'), | |
| appName = 'hivPlatform-migrant', | |
| appFiles = 'app.R', | |
| contentCategory = 'application', | |
| forceUpdate = TRUE | |
| ) | |
| shell: Rscript {0} | |
| working-directory: Server |