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Update SpliceAI GPU#983

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dglemos wants to merge 16 commits intoEnsembl:mainEnsembl/ensembl-variation:mainfrom dglemos:update_spliceai_gpudglemos/ensembl-variation:update_spliceai_gpuCopy head branch name to clipboard

+287-60

Commits

Commits on Apr 6, 2023

• Update SpliceAI gpu

  dglemos

  committed
  9e011a1

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• Remove unsorted files

  dglemos

  committed
  0f4a804

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• Compress final files

  dglemos

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  e3fca03

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Commits on Apr 27, 2023

• Support compressed files as input

  dglemos

  committed
  3625319

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Commits on May 10, 2024

• Update spliceai

  dglemos

  committed
  4259552

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Commits on Aug 23, 2024

• Add script to generate gene annotation file for spliceai

  dglemos

  committed
  02b579c

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• Add comma

  dglemos

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  5901d68

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• Update sql query for non-human

  dglemos

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  88dbd76

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Commits on Aug 27, 2024

• Fix sql query

  dglemos

  committed
  1b71d27

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Commits on Aug 30, 2024

• Add option to simulate_variation

  dglemos

  committed
  96b0d0c

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• simulate_variation to write unique variants

  dglemos

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  cc8dafc

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• simulate_variation fix variable

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  bc55b80

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Commits on Sep 3, 2024

• Update config

  dglemos

  committed
  fe5e96d

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Commits on Jan 20, 2025

• Increase file size

  dglemos

  committed
  d68787a

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Commits on Jan 23, 2025

• Add PATH to spliceai pipeline

  dglemos

  committed
  51ce8aa

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• Merge branch 'main' into update_spliceai_gpu

  dglemos

  authored
  eb382ed

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