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Check truth data
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actions-user committed Sep 14, 2024
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32 changes: 32 additions & 0 deletions code/validation/check_truth.txt
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Expand Up @@ -14188,3 +14188,35 @@ Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-

- The following locations are missing: ['Austria', 'Belgium', 'Bulgaria', 'Croatia', 'Denmark', 'Estonia', 'Finland', 'France', 'Germany', 'Hungary', 'Iceland', 'Italy', 'Latvia', 'Liechtenstein', 'Lithuania', 'Luxembourg', 'Netherlands', 'Norway', 'Poland', 'Romania', 'Slovenia', 'Spain', 'Sweden'].

Latest check of truth data: 2024-09-14

WARNING
Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truncated_ECDC-Incident Cases.csv' at 2024-09-07:

- The following locations are missing: ['Belgium', 'Croatia', 'Denmark', 'Estonia', 'Finland', 'France', 'Germany', 'Iceland', 'Italy', 'Latvia', 'Malta', 'Netherlands', 'Norway', 'Slovakia', 'Spain'].

WARNING
Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truth_ECDC-Incident Cases.csv' at 2024-09-07:

- The following locations are missing: ['Belgium', 'Croatia', 'Denmark', 'Estonia', 'Finland', 'France', 'Germany', 'Iceland', 'Italy', 'Latvia', 'Malta', 'Spain'].

WARNING
Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truncated_ECDC-Incident Hospitalizations.csv' at 2024-09-07:

- The following locations are missing: ['Austria', 'Belgium', 'Bulgaria', 'Croatia', 'Denmark', 'Estonia', 'Finland', 'France', 'Germany', 'Hungary', 'Iceland', 'Italy', 'Latvia', 'Liechtenstein', 'Lithuania', 'Luxembourg', 'Netherlands', 'Norway', 'Poland', 'Romania', 'Slovenia', 'Spain', 'Sweden'].

WARNING
Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truth_ECDC-Incident Deaths.csv' at 2024-09-07:

- The following locations are missing: ['Austria', 'Belgium', 'Croatia', 'Denmark', 'Estonia', 'Finland', 'France', 'Germany', 'Iceland', 'Ireland', 'Italy', 'Latvia', 'Luxembourg', 'Netherlands', 'Norway', 'Spain'].

WARNING
Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truncated_ECDC-Incident Deaths.csv' at 2024-09-07:

- The following locations are missing: ['Austria', 'Belgium', 'Croatia', 'Cyprus', 'Denmark', 'Estonia', 'Finland', 'France', 'Germany', 'Greece', 'Iceland', 'Ireland', 'Italy', 'Latvia', 'Luxembourg', 'Malta', 'Netherlands', 'Norway', 'Portugal', 'Slovakia', 'Slovenia', 'Spain', 'Sweden'].

WARNING
Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truth_ECDC-Incident Hospitalizations.csv' at 2024-09-07:

- The following locations are missing: ['Austria', 'Belgium', 'Bulgaria', 'Croatia', 'Denmark', 'Estonia', 'Finland', 'France', 'Germany', 'Hungary', 'Iceland', 'Italy', 'Latvia', 'Liechtenstein', 'Lithuania', 'Luxembourg', 'Netherlands', 'Norway', 'Poland', 'Romania', 'Slovenia', 'Spain', 'Sweden'].

10 changes: 4 additions & 6 deletions data-truth/README.md
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Expand Up @@ -77,10 +77,11 @@ indicating data expecting to be substanially revised.
Ireland, Italy, Liechtenstein, Lithuania, Malta, Poland, Portugal,
Romania, Slovakia, Slovenia, Sweden

- **Data warning!** Recent missing data for cases in: Hungary and Italy
- **Data warning!** Recent missing data for cases in: Belgium, Croatia,
Denmark, Iceland, and Italy

- **Data warning!** Recent missing data for deaths in: Hungary, Ireland,
and Italy
- **Data warning!** Recent missing data for deaths in: Croatia, Denmark,
Ireland, and Italy

We further evaluate forecasts of cases and deaths against data provided
[ECDC](https://www.ecdc.europa.eu/), which we recommend using as the
Expand Down Expand Up @@ -136,9 +137,6 @@ account the truncation of the data.
The latest case/death data is plotted below, with the dashed line
indicating data expecting to be substanially revised.

## `geom_line()`: Each group consists of only one observation.
## ℹ Do you need to adjust the group aesthetic?

![Plot of cases](plots/Cases.svg) ![Plot of deaths](plots/Deaths.svg)

## Additional data sources
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