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Fix for walkthrough files #1294

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Oct 15, 2024
Merged

Fix for walkthrough files #1294

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2 changes: 1 addition & 1 deletion amr-wind/utilities/sampling/PlaneSampler.cpp
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Original file line number Diff line number Diff line change
Expand Up @@ -65,7 +65,7 @@ void PlaneSampler::check_bounds()
const amrex::Vector<amrex::Real> points = {
point, point + m_axis1[d], point + m_axis2[d]};
for (const auto& pt : points) {
if ((pt <= prob_lo[d]) || (pt >= prob_hi[d])) {
if ((pt < prob_lo[d]) || (pt >= prob_hi[d])) {
amrex::Abort(
"PlaneSampler: Point out of domain. Redefine your "
"planes so they are completely inside the domain.");
Expand Down
28 changes: 14 additions & 14 deletions docs/sphinx/walkthrough/precursor_inp.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -30,7 +30,7 @@ transport.turbulent_prandtl = 0.3333
geometry.prob_lo = 0. 0. 0. # Lo corner coordinates
geometry.prob_hi = 2560. 2560. 1280. # Hi corner coordinates
amr.n_cell = 128 128 64 # Grid cells at coarsest AMRlevel
amr.max_level = 0 # Max AMR level in hierarchy
amr.max_level = 0 # Max AMR level in hierarchy
geometry.is_periodic = 1 1 0 # Periodicity x y z (0/1)

zlo.type = wall_model
Expand Down Expand Up @@ -74,21 +74,21 @@ sampling.output_frequency = 96
sampling.fields = velocity temperature

#---- sample defs ----
sampling.labels = xy-domain xz-domain
sampling.labels = xy-domain xz-domain

sampling.xy-domain.type = PlaneSampler
sampling.xy-domain.num_points = 256 256
sampling.xy-domain.origin = 0.0 0.0 86.5
sampling.xy-domain.axis1 = 2550.0 0.0 0.0
sampling.xy-domain.axis2 = 0.0 2550.0 0.0
sampling.xy-domain.offset_vector = 0.0 0.0 1.0
sampling.xy-domain.offsets = -63.45 0.0 63.45
sampling.xy-domain.type = PlaneSampler
sampling.xy-domain.num_points = 256 256
sampling.xy-domain.origin = 0.0 0.0 86.5
sampling.xy-domain.axis1 = 2550.0 0.0 0.0
sampling.xy-domain.axis2 = 0.0 2550.0 0.0
sampling.xy-domain.offset_vector = 0.0 0.0 1.0
sampling.xy-domain.offsets = -63.45 0.0 63.45

sampling.xz-domain.type = PlaneSampler
sampling.xz-domain.num_points = 256 128
sampling.xz-domain.origin = 0.0 1280.0 0.0
sampling.xz-domain.axis1 = 2550.0 0.0 0.0
sampling.xz-domain.axis2 = 0.0 0.0 1270.0
sampling.xz-domain.type = PlaneSampler
sampling.xz-domain.num_points = 256 128
sampling.xz-domain.origin = 0.0 1280.0 0.0
sampling.xz-domain.axis1 = 2550.0 0.0 0.0
sampling.xz-domain.axis2 = 0.0 0.0 1270.0

#¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨#
# AVERAGING #
Expand Down
32 changes: 16 additions & 16 deletions docs/sphinx/walkthrough/spinup_inp.txt
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Expand Up @@ -11,7 +11,7 @@ time.checkpoint_interval = 1800 # Steps between checkpoi

incflo.physics = ABL
turbulence.model = OneEqKsgsM84 # For neutral ABL, use "Smagorinsky"
TKE.source_terms = KsgsM84Src
TKE.source_terms = KsgsM84Src
incflo.gravity = 0. 0. -9.81 # Gravitational force (3D)
incflo.density = 1.225 # Reference density; make sure this agrees with OpenFAST values
transport.viscosity = 1.0e-5 # Dynamic viscosity [N-s/m^2]
Expand All @@ -24,7 +24,7 @@ transport.turbulent_prandtl = 0.3333
geometry.prob_lo = 0. 0. 0. # Lo corner coordinates
geometry.prob_hi = 2560. 2560. 1280. # Hi corner coordinates
amr.n_cell = 128 128 64 # Grid cells at coarsest AMRlevel
amr.max_level = 0 # Max AMR level in hierarchy
amr.max_level = 0 # Max AMR level in hierarchy
geometry.is_periodic = 1 1 0 # Periodicity x y z (0/1)

zlo.type = wall_model
Expand Down Expand Up @@ -63,22 +63,22 @@ ABL.surface_temp_flux = 0.05 # Surface temperature flux [K-m
incflo.post_processing = sampling

# --- Sampling parameters ---
sampling.output_frequency = 900
sampling.output_frequency = 900
sampling.fields = velocity temperature

#---- sample defs ----
sampling.labels = xy-domain xz-domain
sampling.labels = xy-domain xz-domain

sampling.xy-domain.type = PlaneSampler
sampling.xy-domain.num_points = 256 256
sampling.xy-domain.origin = 0.0 0.0 86.5
sampling.xy-domain.axis1 = 2550.0 0.0 0.0
sampling.xy-domain.axis2 = 0.0 2550.0 0.0
sampling.xy-domain.offset_vector = 0.0 0.0 1.0
sampling.xy-domain.offsets = -63.45 0.0 63.45
sampling.xy-domain.type = PlaneSampler
sampling.xy-domain.num_points = 256 256
sampling.xy-domain.origin = 0.0 0.0 86.5
sampling.xy-domain.axis1 = 2550.0 0.0 0.0
sampling.xy-domain.axis2 = 0.0 2550.0 0.0
sampling.xy-domain.offset_vector = 0.0 0.0 1.0
sampling.xy-domain.offsets = -63.45 0.0 63.45

sampling.xz-domain.type = PlaneSampler
sampling.xz-domain.num_points = 256 128
sampling.xz-domain.origin = 0.0 1280.0 0.0
sampling.xz-domain.axis1 = 2550.0 0.0 0.0
sampling.xz-domain.axis2 = 0.0 0.0 1270.0
sampling.xz-domain.type = PlaneSampler
sampling.xz-domain.num_points = 256 128
sampling.xz-domain.origin = 0.0 1280.0 0.0
sampling.xz-domain.axis1 = 2550.0 0.0 0.0
sampling.xz-domain.axis2 = 0.0 0.0 1270.0
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