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Add boundary column #195

Merged
merged 53 commits into from
Dec 9, 2024
Merged

Add boundary column #195

merged 53 commits into from
Dec 9, 2024

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JoshLoecker
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This adds a new Boundary column to the boundary reaction files

JoshLoecker and others added 30 commits December 5, 2024 07:54
Bumps [astral-sh/setup-uv](https://github.com/astral-sh/setup-uv) from 3 to 4.
- [Release notes](https://github.com/astral-sh/setup-uv/releases)
- [Commits](astral-sh/setup-uv@v3...v4)

---
updated-dependencies:
- dependency-name: astral-sh/setup-uv
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <[email protected]>
Bumps [astral-sh/ruff-action](https://github.com/astral-sh/ruff-action) from 1 to 2.
- [Release notes](https://github.com/astral-sh/ruff-action/releases)
- [Changelog](https://github.com/astral-sh/ruff-action/blob/main/release-drafter.yml)
- [Commits](astral-sh/ruff-action@v1...v2)

---
updated-dependencies:
- dependency-name: astral-sh/ruff-action
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <[email protected]>
Signed-off-by: Josh Loecker <[email protected]>
Signed-off-by: Josh Loecker <[email protected]>
Signed-off-by: Josh Loecker <[email protected]>
Using asyncio.gather seemed to cause a race condition where the proper number of reads was not always stored in the correct variable
…_preprocess

Remove RNASeq Preprocess Hardcoded Filepaths
…ral-sh/ruff-action-2

chore(deps): bump astral-sh/ruff-action from 1 to 2
…ral-sh/setup-uv-4

chore(deps): bump astral-sh/setup-uv from 3 to 4
@JoshLoecker JoshLoecker merged commit 4c1f20c into hotfix Dec 9, 2024
3 checks passed
@JoshLoecker JoshLoecker deleted the feature/add-boundary-column branch December 9, 2024 18:55
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