This a tool for nuclei segmentation. Published in {}.
| File name | Description |
|---|---|
| make_foveal.py | foveal blurred image generation |
| unet.py | unet model definition |
| test.py | main entrance of test of deep learning system |
| train.py | main entrance of training of deep learning system |
| resized_prior.mat | per-defined shape prior |
| Dirs | Description |
|---|---|
| image/ | *.tif original pathology images |
| foveal/ | *.mat containing foveal blurred images |
| cells/ | *.mat containing nuclei-level masks |
| weights/ | containing trained weights |
| results/ | containing testing results |