Split ci.yml into separate actions
#20
Workflow file for this run
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| name: flepicommon-ci | |
| on: | |
| workflow_dispatch: | |
| push: | |
| paths: | |
| - flepimop/R_packages/flepicommon/**/* | |
| branches: | |
| - main | |
| - dev | |
| pull_request: | |
| paths: | |
| - flepimop/R_packages/flepicommon/**/* | |
| branches: | |
| - main | |
| - dev | |
| jobs: | |
| ci: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| R-version: ["4.3.3"] | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| lfs: true | |
| - name: Install R | |
| run: | | |
| UBUNTU_VERSION=$( echo "$( lsb_release -r )" | awk '{print $2}' | sed 's/\.//g' ) | |
| curl -O https://cdn.rstudio.com/r/ubuntu-${UBUNTU_VERSION}/pkgs/r-${R_VERSION}_1_amd64.deb | |
| sudo apt-get update | |
| apt-get install ./r-${R_VERSION}_1_amd64.deb | |
| ln -s /opt/R/${R_VERSION}/bin/R /usr/local/bin/R | |
| ln -s /opt/R/${R_VERSION}/bin/Rscript /usr/local/bin/Rscript | |
| shell: bash | |
| env: | |
| R_VERSION: ${{ matrix.R-version }} | |
| - name: Build flepicommon | |
| run: | | |
| R CMD build flepimop/R_packages/flepicommon/ | |
| shell: bash | |
| - name: Install Dependencies | |
| run: | | |
| files <- list.files() | |
| pkg <- files[startsWith(files, "flepicommon_")] | |
| install.packages(pkg, dependencies = TRUE) | |
| install.packages("devtools") | |
| shell: Rscript {0} | |
| - name: Install flepicommon | |
| run: | | |
| R CMD install --help | |
| echo "-" | |
| TAR_GZ=$( find . -maxdepth 1 -regex ".*flepicommon.*" -printf "%P\n" ) | |
| R CMD install $TAR_GZ | |
| - name: Run Unit Tests | |
| run: | | |
| setwd("flepimop/R_packages/flepicommon") | |
| library(devtools) | |
| devtools::test(stop_on_failure = TRUE) | |
| shell: Rscript {0} |