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ReadCounts-2.4.0

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@edwardsnj edwardsnj released this 15 Jun 22:59
· 271 commits to master since this release
  • Better memory management, batch SNVs if necessary
  • Can now count UMIs in a read-group (cell-barcode) not just number of reads
  • read-group infrastructure now label logic for extracting tags as for Cell-Barcodes or UMIs
  • Predefined cell-barcode and UMI-barcode logic for CellRanger in addition to UMI-tools and STARsolo.