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SCExecute-1.3.0

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@edwardsnj edwardsnj released this 15 Jun 22:59
· 271 commits to master since this release
  • Lots of additional template arguments to facilitate use in pipelines
  • Restrict to multi-region (genic region(s) from genome annotation *.gtf file)
  • Better runtime instrumentation
  • CPU affinity locking - ensuring that running commands can only use a single CPU
  • Cell-barcode only read-groups permitted for spliting BAM files
  • Cell Ranger cell-barcode and umi-barcode extraction logic added