Fix/error with deep copy in cipher context translation

java/src/test/files/rules/issues/ClientEncryptionJavaDuplicatedRSADetectionTestFile.java

@@ -0,0 +1,45 @@
+import javax.crypto.Cipher;
+import javax.crypto.spec.OAEPParameterSpec;
+import javax.crypto.spec.PSource;
+import java.security.GeneralSecurityException;
+import java.security.Key;
+import java.security.PrivateKey;
+import java.security.PublicKey;
+import java.security.spec.MGF1ParameterSpec;
+
+public class ClientEncryptionJavaDuplicatedRSADetectionTestFile {
+
+    private static final String ASYMMETRIC_CYPHER = "RSA/ECB/OAEPWith{ALG}AndMGF1Padding";
+    private static final String SYMMETRIC_KEY_TYPE = "AES";
+
+    public static byte[] wrapSecretKey(PublicKey publicKey, Key privateKey, String oaepDigestAlgorithm) throws Exception {
+        try {
+            MGF1ParameterSpec mgf1ParameterSpec = new MGF1ParameterSpec(oaepDigestAlgorithm);
+            String asymmetricCipher = ASYMMETRIC_CYPHER.replace("{ALG}", mgf1ParameterSpec.getDigestAlgorithm());
+            Cipher cipher = Cipher.getInstance(asymmetricCipher); // Noncompliant {{(PublicKeyEncryption) RSA-OAEP}}
+            cipher.init(Cipher.WRAP_MODE, publicKey, getOaepParameterSpec(mgf1ParameterSpec));
+            return cipher.wrap(privateKey);
+        } catch (GeneralSecurityException e) {
+            throw e;
+        }
+    }
+
+    public static Key unwrapSecretKey(PrivateKey decryptionKey, byte[] keyBytes, String oaepDigestAlgorithm) throws Exception {
+        if (!oaepDigestAlgorithm.contains("-")) {
+            oaepDigestAlgorithm = oaepDigestAlgorithm.replace("SHA", "SHA-");
+        }
+        try {
+            MGF1ParameterSpec mgf1ParameterSpec = new MGF1ParameterSpec(oaepDigestAlgorithm);
+            String asymmetricCipher = ASYMMETRIC_CYPHER.replace("{ALG}", mgf1ParameterSpec.getDigestAlgorithm());
+            Cipher cipher = Cipher.getInstance(asymmetricCipher);  // Noncompliant {{(PublicKeyEncryption) RSA-OAEP}}
+            cipher.init(Cipher.UNWRAP_MODE, decryptionKey, getOaepParameterSpec(mgf1ParameterSpec));
+            return cipher.unwrap(keyBytes, SYMMETRIC_KEY_TYPE, Cipher.SECRET_KEY);
+        } catch (GeneralSecurityException e) {
+            throw e;
+        }
+    }
+
+    private static OAEPParameterSpec getOaepParameterSpec(MGF1ParameterSpec mgf1ParameterSpec) {
+        return new OAEPParameterSpec(mgf1ParameterSpec.getDigestAlgorithm(), "MGF1", mgf1ParameterSpec, PSource.PSpecified.DEFAULT);
+    }
+}

java/src/test/java/com/ibm/plugin/rules/issues/ClientEncryptionJavaDuplicatedRSADetectionTest.java

@@ -0,0 +1,198 @@
+/*
+ * SonarQube Cryptography Plugin
+ * Copyright (C) 2024 IBM
+ *
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements.  See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to you under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License.  You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package com.ibm.plugin.rules.issues;
+
+import com.ibm.engine.detection.DetectionStore;
+import com.ibm.engine.model.Algorithm;
+import com.ibm.engine.model.CipherAction;
+import com.ibm.engine.model.IValue;
+import com.ibm.engine.model.OperationMode;
+import com.ibm.engine.model.context.CipherContext;
+import com.ibm.mapper.model.INode;
+import com.ibm.mapper.model.KeyLength;
+import com.ibm.mapper.model.Mode;
+import com.ibm.mapper.model.Oid;
+import com.ibm.mapper.model.Padding;
+import com.ibm.mapper.model.PublicKeyEncryption;
+import com.ibm.mapper.model.functionality.Decapsulate;
+import com.ibm.mapper.model.functionality.Encapsulate;
+import com.ibm.plugin.TestBase;
+import org.junit.jupiter.api.Disabled;
+import org.junit.jupiter.api.Test;
+import org.sonar.java.checks.verifier.CheckVerifier;
+import org.sonar.plugins.java.api.JavaCheck;
+import org.sonar.plugins.java.api.JavaFileScannerContext;
+import org.sonar.plugins.java.api.semantic.Symbol;
+import org.sonar.plugins.java.api.tree.Tree;
+
+import javax.annotation.Nonnull;
+import java.util.List;
+
+import static org.assertj.core.api.Assertions.assertThat;
+
+class ClientEncryptionJavaDuplicatedRSADetectionTest extends TestBase {
+
+    @Test
+    @Disabled
+    void test() {
+        CheckVerifier.newVerifier()
+                .onFile(
+                        "src/test/files/rules/issues/ClientEncryptionJavaDuplicatedRSADetectionTestFile.java")
+                .withChecks(this)
+                .verifyIssues();
+    }
+
+    @Override
+    public void asserts(
+            int findingId,
+            @Nonnull DetectionStore<JavaCheck, Tree, Symbol, JavaFileScannerContext> detectionStore,
+            @Nonnull List<INode> nodes) {
+
+        if (findingId == 0) {
+            /*
+             * Detection Store
+             */
+
+            assertThat(detectionStore.getDetectionValues()).hasSize(1);
+            assertThat(detectionStore.getDetectionValueContext()).isInstanceOf(CipherContext.class);
+            IValue<Tree> value0 = detectionStore.getDetectionValues().get(0);
+            assertThat(value0).isInstanceOf(Algorithm.class);
+            assertThat(value0.asString()).isEqualTo("RSA/ECB/OAEPWith{ALG}AndMGF1Padding");
+
+            DetectionStore<JavaCheck, Tree, Symbol, JavaFileScannerContext> store_1 =
+                    getStoreOfValueType(OperationMode.class, detectionStore.getChildren());
+            assertThat(store_1.getDetectionValues()).hasSize(1);
+            assertThat(store_1.getDetectionValueContext()).isInstanceOf(CipherContext.class);
+            IValue<Tree> value0_1 = store_1.getDetectionValues().get(0);
+            assertThat(value0_1).isInstanceOf(OperationMode.class);
+            assertThat(value0_1.asString()).isEqualTo("3");
+
+            DetectionStore<JavaCheck, Tree, Symbol, JavaFileScannerContext> store_2 =
+                    getStoreOfValueType(CipherAction.class, detectionStore.getChildren());
+            assertThat(store_2.getDetectionValues()).hasSize(1);
+            assertThat(store_2.getDetectionValueContext()).isInstanceOf(CipherContext.class);
+            IValue<Tree> value0_2 = store_2.getDetectionValues().get(0);
+            assertThat(value0_2).isInstanceOf(CipherAction.class);
+            assertThat(value0_2.asString()).isEqualTo("WRAP");
+
+            /*
+             * Translation
+             */
+
+            assertThat(nodes).hasSize(1);
+
+            // PublicKeyEncryption
+            INode publicKeyEncryptionNode = nodes.get(0);
+            assertThat(publicKeyEncryptionNode.getKind()).isEqualTo(PublicKeyEncryption.class);
+            assertThat(publicKeyEncryptionNode.getChildren()).hasSize(5);
+            assertThat(publicKeyEncryptionNode.asString()).isEqualTo("RSA-OAEP");
+
+            // KeyLength under PublicKeyEncryption
+            INode keyLengthNode = publicKeyEncryptionNode.getChildren().get(KeyLength.class);
+            assertThat(keyLengthNode).isNotNull();
+            assertThat(keyLengthNode.getChildren()).isEmpty();
+            assertThat(keyLengthNode.asString()).isEqualTo("2048");
+
+            // Oid under PublicKeyEncryption
+            INode oidNode = publicKeyEncryptionNode.getChildren().get(Oid.class);
+            assertThat(oidNode).isNotNull();
+            assertThat(oidNode.getChildren()).isEmpty();
+            assertThat(oidNode.asString()).isEqualTo("1.2.840.113549.1.1.7");
+
+            // Padding under PublicKeyEncryption
+            INode paddingNode = publicKeyEncryptionNode.getChildren().get(Padding.class);
+            assertThat(paddingNode).isNotNull();
+            assertThat(paddingNode.getChildren()).isEmpty();
+            assertThat(paddingNode.asString()).isEqualTo("OAEP");
+
+            // Encapsulate under PublicKeyEncryption
+            INode encapsulateNode = publicKeyEncryptionNode.getChildren().get(Encapsulate.class);
+            assertThat(encapsulateNode).isNotNull();
+            assertThat(encapsulateNode.getChildren()).isEmpty();
+            assertThat(encapsulateNode.asString()).isEqualTo("ENCAPSULATE");
+
+            // Mode under PublicKeyEncryption
+            INode modeNode = publicKeyEncryptionNode.getChildren().get(Mode.class);
+            assertThat(modeNode).isNotNull();
+            assertThat(modeNode.getChildren()).isEmpty();
+            assertThat(modeNode.asString()).isEqualTo("ECB");
+
+        } else {
+            /*
+             * Detection Store
+             */
+
+            assertThat(detectionStore.getDetectionValues()).hasSize(1);
+            assertThat(detectionStore.getDetectionValueContext()).isInstanceOf(CipherContext.class);
+            IValue<Tree> value0 = detectionStore.getDetectionValues().get(0);
+            assertThat(value0).isInstanceOf(Algorithm.class);
+            assertThat(value0.asString()).isEqualTo("RSA/ECB/OAEPWith{ALG}AndMGF1Padding");
+
+            DetectionStore<JavaCheck, Tree, Symbol, JavaFileScannerContext> store_1 =
+                    getStoreOfValueType(OperationMode.class, detectionStore.getChildren());
+            assertThat(store_1.getDetectionValues()).hasSize(1);
+            assertThat(store_1.getDetectionValueContext()).isInstanceOf(CipherContext.class);
+            IValue<Tree> value0_1 = store_1.getDetectionValues().get(0);
+            assertThat(value0_1).isInstanceOf(OperationMode.class);
+            assertThat(value0_1.asString()).isEqualTo("4");
+
+            /*
+             * Translation
+             */
+            assertThat(nodes).hasSize(1);
+
+            // PublicKeyEncryption
+            INode publicKeyEncryptionNode1 = nodes.get(0);
+            assertThat(publicKeyEncryptionNode1.getKind()).isEqualTo(PublicKeyEncryption.class);
+            assertThat(publicKeyEncryptionNode1.getChildren()).hasSize(5);
+            assertThat(publicKeyEncryptionNode1.asString()).isEqualTo("RSA-OAEP");
+
+            // Mode under PublicKeyEncryption
+            INode modeNode1 = publicKeyEncryptionNode1.getChildren().get(Mode.class);
+            assertThat(modeNode1).isNotNull();
+            assertThat(modeNode1.getChildren()).isEmpty();
+            assertThat(modeNode1.asString()).isEqualTo("ECB");
+
+            // Decapsulate under PublicKeyEncryption
+            INode decapsulateNode = publicKeyEncryptionNode1.getChildren().get(Decapsulate.class);
+            assertThat(decapsulateNode).isNotNull();
+            assertThat(decapsulateNode.getChildren()).isEmpty();
+            assertThat(decapsulateNode.asString()).isEqualTo("DECAPSULATE");
+
+            // Oid under PublicKeyEncryption
+            INode oidNode1 = publicKeyEncryptionNode1.getChildren().get(Oid.class);
+            assertThat(oidNode1).isNotNull();
+            assertThat(oidNode1.getChildren()).isEmpty();
+            assertThat(oidNode1.asString()).isEqualTo("1.2.840.113549.1.1.7");
+
+            // Padding under PublicKeyEncryption
+            INode paddingNode1 = publicKeyEncryptionNode1.getChildren().get(Padding.class);
+            assertThat(paddingNode1).isNotNull();
+            assertThat(paddingNode1.getChildren()).isEmpty();
+            assertThat(paddingNode1.asString()).isEqualTo("OAEP");
+
+            // KeyLength under PublicKeyEncryption
+            INode keyLengthNode1 = publicKeyEncryptionNode1.getChildren().get(KeyLength.class);
+            assertThat(keyLengthNode1).isNotNull();
+            assertThat(keyLengthNode1.getChildren()).isEmpty();
+            assertThat(keyLengthNode1.asString()).isEqualTo("2048");
+        }
+    }
+}

mapper/src/main/java/com/ibm/mapper/ITranslator.java

@@ -75,7 +75,7 @@ private Map<Integer, List<INode>> translateStore(@Nonnull DetectionStore<R, T, S
                 .ifPresent(
                         actionValue -> {
                             final Optional<INode> translatedNode =
-                                    translate(bundle, actionValue, context, filePath);
+                                    this.translate(bundle, actionValue, context, filePath);
                             translatedNode.ifPresent(
                                     node -> {
                                         final List<INode> newNodes = new ArrayList<>();
@@ -88,7 +88,7 @@ private Map<Integer, List<INode>> translateStore(@Nonnull DetectionStore<R, T, S
                     final List<INode> translatedNodesForId = new ArrayList<>();
                     for (IValue<T> value : values) {
                         final Optional<INode> translatedNode =
-                                translate(bundle, value, context, filePath);
+                                this.translate(bundle, value, context, filePath);
                         translatedNode.ifPresent(translatedNodesForId::add);
                     }
                     // to get the list for the key, or create a new one if it doesn't exist and add
@@ -224,8 +224,9 @@ private void append(
                                             .forEach(mergedCollectionNode::put);
 
                                     parentNode.put(mergedCollectionNode);
-
-                                } else {
+                                } else if (existingNode.is(childNode.getKind())
+                                        && !existingNode.asString().equals(childNode.asString())) {
+                                    // add node to new roots
                                     final INode newParent = parentNode.deepCopy();
                                     newParent.put(childNode);
                                     newRoots.add(newParent);

mapper/src/main/java/com/ibm/mapper/model/algorithms/RSA.java

@@ -94,4 +94,18 @@ public RSA(
     public RSA(@Nonnull final Class<? extends IPrimitive> asKind, @Nonnull RSA rsa) {
         super(rsa, asKind);
     }
+
+    private RSA(@Nonnull final RSA rsa) {
+        super(rsa.name, rsa.kind, rsa.detectionLocation);
+    }
+
+    @Nonnull
+    @Override
+    public INode deepCopy() {
+        RSA copy = new RSA(this);
+        for (INode child : this.children.values()) {
+            copy.children.put(child.getKind(), child.deepCopy());
+        }
+        return copy;
+    }
 }

mapper/src/main/java/com/ibm/mapper/model/padding/OAEP.java

@@ -66,4 +66,18 @@ public Optional<MaskGenerationFunction> getMGF() {
         }
         return Optional.of((MaskGenerationFunction) node);
     }
+
+    private OAEP(@Nonnull OAEP oaep) {
+        super(oaep.getName(), oaep.getDetectionContext(), Padding.class);
+    }
+
+    @Nonnull
+    @Override
+    public INode deepCopy() {
+        OAEP copy = new OAEP(this);
+        for (INode child : this.children.values()) {
+            copy.children.put(child.getKind(), child.deepCopy());
+        }
+        return copy;
+    }
 }