Merge pull request #3 from IFCA-Advanced-Computing/develop

Use github actions instead of CI/CD gitlab pipeline

.github/workflows/cicd.yml

@@ -0,0 +1,84 @@
+name: CI/CD Pipeline
+
+on:
+  push:
+    branches:
+      - "*"
+  pull_request:
+    branches:
+      - main
+
+jobs:
+  lint:
+    name: Lint
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v2
+
+      - name: Set up Python
+        uses: actions/setup-python@v2
+        with:
+          python-version: "3.10"
+
+      - name: Install and configure poetry
+        run: |
+          pip install poetry
+          poetry config virtualenvs.create false
+          poetry install
+
+      - name: Install dependencies
+        run: |
+          pip install --upgrade pip
+          pip install tox
+
+      - name: Linting
+        run: tox -e bandit,black,flake8
+
+  test:
+    name: Test
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v2
+
+      - name: Set up Python
+        uses: actions/setup-python@v2
+        with:
+          python-version: "3.9"
+
+      - name: Install and configure poetry
+        run: |
+          pip install poetry
+          poetry config virtualenvs.create false
+          poetry install
+
+      - name: Install dependencies
+        run: |
+          pip install --upgrade pip
+          pip install tox
+
+      - name: Testing
+        run: tox -e py39,py310,py311,py312
+
+  build:
+    name: Build
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v2
+
+      - name: Set up Python
+        uses: actions/setup-python@v2
+        with:
+          python-version: "3.10"
+
+      - name: Install dependencies
+        run: |
+          pip install --upgrade pip
+          pip install poetry
+
+      - name: Build package
+        run: |
+          poetry build
+          pip install dist/*.whl

.github/workflows/pypi.yml

@@ -0,0 +1,35 @@
+name: Publish Package in PyPI
+
+on:
+  release:
+    types: [published]
+
+permissions:
+  contents: read
+
+jobs:
+  publish:
+    runs-on: ubuntu-latest
+
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+
+      - name: Set up Python 3.10
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.10"
+
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install build
+
+      - name: Build and upload package
+        run: |
+          python -m build
+          python -m twine upload dist/*
+        env:
+          TWINE_USERNAME: ${{ secrets.PYPI_USERNAME }}
+          TWINE_PASSWORD: ${{ secrets.PYPI_PASSWORD }}
+

anjana/anonymity/utils/utils.py

@@ -158,9 +158,12 @@ def generate_intervals(
     sup: typing.Union[int, float],
     step: int,
 ) -> list:
-    """Given a quasi-identifier of numeric type, creates a list containing an
+    """
+    Generate intervals as hierarchies.
+
+    Given a quasi-identifier of numeric type, creates a list containing an
     interval-based generalization (hierarchy) of the values of the quasi-identifier.
-    The intervals will have the length entered in the parameter step.
+    The intervals will have the length entered in step.
 
     :param quasi_ident: values of the quasi-identifier on which the interval-based
         generalization is to be obtained

examples/hospital.py

@@ -38,10 +38,7 @@
         0: data["gender"].values,
         1: np.array(["*"] * len(data["gender"].values)),
     },
-    "city": {
-        0: data["city"].values,
-        1: np.array(["*"] * len(data["city"].values))
-    },
+    "city": {0: data["city"].values, 1: np.array(["*"] * len(data["city"].values))},
 }
 data_anon = k_anonymity(data, ident, quasi_ident, k, supp_level, hierarchies)
 print(data_anon)