Modify parse_ndr to reverse gene_id,tx_id fields in new bambu3.0.8

IGDRion · Dec 8, 2023 · 550ddd9 · 550ddd9
1 parent 94f1bf4
commit 550ddd9
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/bin/filter_gtf_ndr.py b/bin/filter_gtf_ndr.py
@@ -26,7 +26,7 @@ def parse_ndr(csv, origin, th) -> Set[str]:
         elif origin == "tfkmers":
             line = parse_tfkmers(line)
 
-        _, tx_id, ndr = line
+        tx_id, _, ndr = line
         ndr = float(ndr)
 
         if ndr < th: