COMP: Replace pip with conda for notebook tests

InsightSoftwareConsortium · Jun 20, 2023 · 77f62b8 · 77f62b8
1 parent 6bf55b2
commit 77f62b8
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diff --git a/.binder/environment.yml b/.binder/environment.yml
@@ -0,0 +1,11 @@
+name: binder
+channels:
+  - conda-forge
+dependencies:
+  - python=3.9
+  - jupyter-server-proxy>=1.4
+  - pip
+  - websockify
+  - libxcb
+  - pip:
+    - jupyter-desktop-server
diff --git a/.github/workflows/notebook-test.yml b/.github/workflows/notebook-test.yml
@@ -14,12 +14,22 @@ jobs:
       - uses: actions/setup-python@v3
         with:
           python-version: '3.9'
+      - name: Update conda
+        run: |
+          conda update -n base -c defaults conda
       - name: Install build dependencies
         run: |
-          python -m pip install --upgrade pip
+          conda env update --file ./.binder/environment.yml --name binder
+      - name: Activate conda environment
+        run: |
+          source $CONDA/etc/profile.d/conda.sh
+          conda activate binder
+      - name: Install additional dependencies with pip
+        run: |
           python -m pip install -r ./.binder/requirements.txt
           python -m pip install pytest nbmake
       - name: Test notebooks
-        shell: bash
         run: |
           pytest --nbmake --nbmake-timeout=3000 examples/*.ipynb
+
+