ENH: Bump elastix to 5.2.0, update wasm

Rebase wasm patches for elastix. Bump itk-wasm and the ITK-Wasm docker
image for ITK 5.4.0 support. Disable a wasi test with an odd error:

```
3: Test command: /wasi-runtimes/wasmtime/bin/wasmtime-pwd.sh "/work/wasi-build/elastix.wasi.wasm" "/work/wasm/test/data/input/parameters_single.json" "/work/wasi-build/wasm/CT_2D_head_registered_initial.iwi.cbor" "/work/wasi-build/wasm/CT_2D_head_initial.h5" "/work/wasi-build/wasm/CT_2D_head_initial.json" "-f" "/work/wasm/test/data/input/CT_2D_head_fixed.iwi.cbor" "-m" "/work/wasm/test/data/input/CT_2D_head_moving.iwi.cbor" "-i" "/work/wasm/test/data/input/CT_2D_head_translation.h5"
3: Working Directory: /work/wasi-build/wasm
3: Test timeout computed to be: 10000000
3: Error: failed to run main module `/work/wasi-build/elastix.wasi.wasm`
3:
3: Caused by:
3:     0: failed to invoke command default
3:     1: error while executing at wasm backtrace:
3:            0: 0x388ff6 - elastix.wasi.wasm!__cxx_global_array_dtor.54
3:            1: 0x95b08 - elastix.wasi.wasm!__funcs_on_exit
3:            2: 0x95cb2 - elastix.wasi.wasm!__wasm_call_dtors
3:            3: 0x15df748 - elastix.wasi.wasm!itk_wasm_delayed_exit
3:            4: 0x15df7d1 - elastix.wasi.wasm!_start
3:        note: using the `WASMTIME_BACKTRACE_DETAILS=1` environment variable may show more debugging information
3:     2: wasm trap: uninitialized element
 3/10 Test  #3: elastix-wasm-2d-initial-transform-test ....................***Failed    7.99 sec
```

Also update CI configuration accordingly.

.github/workflows/wasm.yml

@@ -31,27 +31,29 @@ jobs:
 
     - uses: actions/setup-node@64ed1c7eab4cce3362f8c340dee64e5eaeef8f7c # v3.6.0
       with:
-        node-version: '18'
+        node-version: '22'
+
+    - name: Install
+      uses: pnpm/action-setup@v2
+      with:
+        run_install: true
+
+    - uses: actions/setup-python@61a6322f88396a6271a6ee3565807d608ecaddd1 # v4.7.0
+      with:
+        python-version: '3.11'
 
     - name: Install
       run: |
-        npm ci
-        npm run build:testData
+        pnpm run build:testData
 
-    - name: Build TypeScript
-      working-directory: ./wasm/typescript
+    - name: Build
       run: |
-        npm ci
-        npm run build
+        pnpm run build
 
     - name: Test TypeScript
       working-directory: ./wasm/typescript
       run: |
-        npm test
-
-    - uses: actions/setup-python@61a6322f88396a6271a6ee3565807d608ecaddd1 # v4.7.0
-      with:
-        python-version: '3.10'
+        pnpm test
 
     - name: Test Python WASI
       working-directory: ./wasm/python/itkwasm-elastix-wasi

.gitignore

@@ -22,3 +22,4 @@ wasi-build
 emscripten-build
 wasm/typescript/demo/
 wasm/test
+micromamba/

CMakeLists.txt

@@ -67,8 +67,8 @@ endif()
 # set(elastix_GIT_REPOSITORY "https://github.com/SuperElastix/elastix.git")
 set(elastix_GIT_REPOSITORY "https://github.com/thewtex/elastix.git")
 # Upstream + wasm patches
-# Branch: ITKElastix-2023-01-01-022aa6cd
-set(elastix_GIT_TAG "022aa6cdaaa5621f3d6b2f245c388a9669cc7ef9")
+# Branch: ITKElastix-2024-07-18-ebb429a33b
+set(elastix_GIT_TAG "0ab3f57a6528cce609feedeb1650e7c850beca94")
 FetchContent_Declare(
   elx
   GIT_REPOSITORY ${elastix_GIT_REPOSITORY}

environment.yml

@@ -0,0 +1,11 @@
+name: itkwasm-elastix
+channels:
+  - conda-forge
+dependencies:
+  - pytest
+  - python=3.11
+  - pip
+  - pip:
+    - hatch
+    - itkwasm-compare-images
+    - itkwasm-image-io