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ENH: Add python_unittest/test_ElastixRegistrationMethod.py
Added a Python unittest based unit test for ElastixRegistrationMethod.
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"""Module providing Python unit tests for itk.ElastixRegistrationMethod.""" | ||
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import unittest | ||
import itk | ||
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class ElastixRegistrationMethodTestCase(unittest.TestCase): | ||
"""Tests itk.ElastixRegistrationMethod""" | ||
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def test_SimilarityTransform(self) -> None: | ||
"""Tests SimilarityTransform""" | ||
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def set_pixels_of_object(image, index_value: int, size_value: int) -> None: | ||
for i in range(index_value, index_value + size_value): | ||
for j in range(index_value, index_value + size_value): | ||
image.SetPixel([i, j], 1) | ||
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dimension = 2 | ||
ImageType = itk.Image[itk.F, dimension] | ||
SizeType = itk.Size[dimension] | ||
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fixed_object_size_value = 32 | ||
fixed_object_index_value = fixed_object_size_value | ||
fixed_image_size_value = 4 * fixed_object_size_value | ||
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moving_object_size_value = 40 | ||
moving_object_index_value = moving_object_size_value | ||
moving_image_size_value = 4 * moving_object_size_value | ||
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fixed_image = ImageType.New(Regions=SizeType.Filled(fixed_image_size_value)) | ||
fixed_image.AllocateInitialized() | ||
set_pixels_of_object( | ||
fixed_image, fixed_object_index_value, fixed_object_size_value | ||
) | ||
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moving_image = ImageType.New(Regions=SizeType.Filled(moving_image_size_value)) | ||
moving_image.AllocateInitialized() | ||
set_pixels_of_object( | ||
moving_image, moving_object_index_value, moving_object_size_value | ||
) | ||
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parameter_map = { | ||
"ImageSampler": ("Full",), | ||
"MaximumNumberOfIterations": ("50",), | ||
"Metric": ("AdvancedNormalizedCorrelation",), | ||
"Optimizer": ("AdaptiveStochasticGradientDescent",), | ||
"Transform": ("SimilarityTransform",), | ||
} | ||
registration = itk.ElastixRegistrationMethod[ImageType, ImageType].New( | ||
FixedImage=fixed_image, | ||
MovingImage=moving_image, | ||
ParameterObject=itk.ParameterObject.New(ParameterMap=parameter_map), | ||
) | ||
registration.Update() | ||
transform_parameter_object = registration.GetTransformParameterObject() | ||
transform_parameters = transform_parameter_object.GetParameter( | ||
0, "TransformParameters" | ||
) | ||
self.assertEqual(len(transform_parameters), 4) | ||
self.assertAlmostEqual( | ||
float(transform_parameters[0]), | ||
float(moving_object_size_value) / float(fixed_object_size_value), | ||
1, | ||
) | ||
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if __name__ == "__main__": | ||
unittest.main() |