removed expfact files and api

Jhsmit · Nov 15, 2020 · f61366b · f61366b
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diff --git a/AUTHORS.rst b/AUTHORS.rst
@@ -2,14 +2,7 @@
 Credits
 =======
 
-This package is a collection of two implemenations of calculating intrinsic deuterium exchange rates of amide hydrogens based on a protein's primary sequence and the temperature and pH of the experiment.
-
-
-ExPfact
--------
-https://github.com/skinnersp/exPfact
-
-  Skinner, S. P., Radou, G., Tuma, R., Houwing-Duistermaat, J. J. & Paci, E. Estimating Constraints for Protection Factors from HDX-MS Data. `Biophysical Journal <https://doi.org/10.1016/j.bpj.2019.02.024>`_ 116, 1194–1203 (2019).
+This package is a collection of one implemenation of calculating intrinsic deuterium exchange rates of amide hydrogens based on a protein's primary sequence and the temperature and pH of the experiment.
 
 
 PSX

diff --git a/README.rst b/README.rst
@@ -16,7 +16,7 @@ HDXrate
 
 
 
-Python package collection for HDX intrinsic exchange rate calculation. This package bundles two existing implementations of this calculation, exPfact and PSX.
+Python package collection for HDX intrinsic exchange rate calculation. This package bundles existing implementations of this calculation.
 
 The calculations are based on the following papers:
 
@@ -49,13 +49,6 @@ Usage
 Credits
 -------
 
-ExPfact
--------
-https://github.com/skinnersp/exPfact
-
-  Skinner, S. P., Radou, G., Tuma, R., Houwing-Duistermaat, J. J. & Paci, E. Estimating Constraints for Protection Factors from HDX-MS Data. `Biophysical Journal <https://doi.org/10.1016/j.bpj.2019.02.024>`__ 116, 1194–1203 (2019).
-
-
 PSX
 ```
 https://github.com/Niels-Bohr-Institute-XNS-StructBiophys/PSX

diff --git a/comparisons/Rate differences histograms.png b/comparisons/Rate differences histograms.png
diff --git a/comparisons/Rate differences.png b/comparisons/Rate differences.png
diff --git a/comparisons/comparison.py b/comparisons/comparison.py
diff --git a/comparisons/random_sequences.py b/comparisons/random_sequences.py
diff --git a/examples.rst b/examples.rst
diff --git a/hdxrate/expfact/__init__.py b/hdxrate/expfact/__init__.py
diff --git a/hdxrate/expfact/api.py b/hdxrate/expfact/api.py
diff --git a/hdxrate/expfact/constants.py b/hdxrate/expfact/constants.py