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update template
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Jhsmit committed Oct 18, 2021
1 parent 3990d67 commit 4829722
Showing 1 changed file with 4 additions and 1 deletion.
5 changes: 4 additions & 1 deletion templates/04_SecB_batch_fit_and_checkpoint.py
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import numpy as np
from matplotlib import cm

from pyhdx.fileIO import csv_to_protein, read_dynamx, dataframe_to_file
from pyhdx.fileIO import csv_to_protein, read_dynamx, dataframe_to_file, save_fitresult
from pyhdx.fitting import fit_gibbs_global_batch
from pyhdx.fitting_torch import CheckPoint
from pyhdx.models import PeptideMasterTable, HDXMeasurement, HDXMeasurementSet
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#Machine readable output
result.to_file(output_dir / 'Batch_fit_result.csv', fmt='csv')

#Save full fitresult
save_fitresult(output_dir / 'SecB_tetramer_dimer_batch', result)

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