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fix dg color scatter plotting for newer pandas versions #335

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merged 1 commit into from
Sep 26, 2023
Merged

fix dg color scatter plotting for newer pandas versions #335

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24 changes: 12 additions & 12 deletions pyhdx/plot.py
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Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
from contextlib import contextmanager
from copy import copy
from pathlib import Path
from typing import Type, Union
from typing import Optional, Type, Union

import matplotlib as mpl
import matplotlib.pyplot as plt
Expand Down Expand Up @@ -869,16 +869,16 @@ def rainbowclouds(
# todo this should also take Pd.Series?
def colorbar_scatter(
ax,
data,
y="dG",
yerr="covariance",
data: pd.DataFrame,
y:str="dG",
yerr:str="covariance",
cmap=None,
norm=None,
cbar=True,
cbar_kwargs=None,
invert_yaxis=None,
symmetric=False,
sclf=1e-3,
cbar:bool=True,
cbar_kwargs:Optional[dict]=None,
invert_yaxis:bool=False,
symmetric:bool=False,
sclf:float=1e-3,
**kwargs,
):
# todo make error bars optional
Expand All @@ -903,9 +903,9 @@ def colorbar_scatter(
ax.scatter(data.index, data[y] * sclf, color=colors, **scatter_kwargs)
with autoscale_turned_off(ax):
ax.errorbar(
data.index,
data[y] * sclf,
yerr=data[yerr] * sclf,
np.array(data.index),
np.array(data[y] * sclf),
yerr=np.array(data[yerr] * sclf),
zorder=-1,
**errorbar_kwargs,
)
Expand Down